Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00159 ATGGGGCTCTGCTGCTTCGTCCACCCTTGTCGTACTTTGTTCGTGATCTTCCTGATTCTTCGAAATAAACAAGATGTTTCCAGTACCACATTCACTTTCGTCAACAAGTGTGATTTCATTGTTTGGCCCGGAATTCTAGCCGGCGCCGGCAGCCCAAAGCTAGCGACCACTGGTTTCGAGCTCTTGAGAGAAAGCTCTCGCTCATTGCAAGCACCAACAGGGTGGTCTGGACGATTCTGGGGTCGAACCGGCTGTAACTTTGACAGTTCCGATAGTTTCATCTGCGCAACCGGAGACTGTGGCTCCGGTGAGGTTGAATGTAGCGGCACCGGCGCCACTCCTCCAGCAACTTTAGCCGAATTCACACTTGGATCGGGCTCACTGGACTTCTACGATGTCAGCCTCGTCGATGGATACAACCTTCCCGTGGTCATCGAAGGGACCGGCGCTTCAGAAACTTGCGGGTCAACAGGATGTGCTACGGACGTAAATCGGCAGTGTCCGACCGAGCTGAGAACGGAACATGCTGGAGCATGTAAGAGCGCGTGTGCGGCGTTTGGAACGCCGGAGTACTGTTGCAGAGGCTCTTACAACTCGCCGTCGACATGTCAGCCGTCGGTGTATTCTCAAATGTTCAAATCAGCATGTCCCCGATCATATAGCTACGCCTACGACGATTCCACAAGTACCTTCACTTGCTTTGGTGAACATTACACCATTACATTTTGCCCTTCTTCTCCGAGCCTGAAATCTACTACGGAGTCTACTCCGACAACTGTGTCGGCTCCGAGGCCAGGCTCTAAACCGGATTCATCAGAGGAAGAAGCACTGCCTGCTTCCTGGCTTGCGAATTTGGCCACAGCCACAGGGGACTCAGATAAAACGCATCCTCCTCCTGCAGTGCTTGTTTTCTTAATTATGCCACGCTTCCTCATTTTCTCACGTCCTTGA 951 52.26 MGLCCFVHPCRTLFVIFLILRNKQDVSSTTFTFVNKCDFIVWPGILAGAGSPKLATTGFELLRESSRSLQAPTGWSGRFWGRTGCNFDSSDSFICATGDCGSGEVECSGTGATPPATLAEFTLGSGSLDFYDVSLVDGYNLPVVIEGTGASETCGSTGCATDVNRQCPTELRTEHAGACKSACAAFGTPEYCCRGSYNSPSTCQPSVYSQMFKSACPRSYSYAYDDSTSTFTCFGEHYTITFCPSSPSLKSTTESTPTTVSAPRPGSKPDSSEEEALPASWLANLATATGDSDKTHPPPAVLVFLIMPRFLIFSRP 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3831886 3832997 + Bpe002470.1 Bpe10g00159 109281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00159 316 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Bpe10g00159 316 PRINTS Pathogenesis-related protein signature 234 243 IPR001938 -
Bpe10g00159 316 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Bpe10g00159 316 PRINTS Pathogenesis-related protein signature 78 89 IPR001938 -
Bpe10g00159 316 SMART tha2 31 244 IPR001938 -
Bpe10g00159 316 MobiDBLite consensus disorder prediction 248 266 - -
Bpe10g00159 316 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 16 263 - -
Bpe10g00159 316 Gene3D Thaumatin 29 244 IPR037176 -
Bpe10g00159 316 ProSiteProfiles Thaumatin family profile. 28 244 IPR001938 -
Bpe10g00159 316 SUPERFAMILY Osmotin, thaumatin-like protein 29 245 IPR037176 -
Bpe10g00159 316 PANTHER OS03G0233200 PROTEIN 16 263 IPR001938 -
Bpe10g00159 316 MobiDBLite consensus disorder prediction 248 276 - -
Bpe10g00159 316 CDD TLP-PA 30 243 - -
Bpe10g00159 316 Pfam Thaumatin family 35 244 IPR001938 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe10g00159 Bpe15g00474 CCT
Bpe10g00159 Bpe15g00474 ECH
Bpe06g00130 Bpe10g00159 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00722 Bpe-Chr7:13780997 Bpe10g00159 Bpe-Chr10:3831886 3.84E-56 dispersed
Bpe10g00159 Bpe-Chr10:3831886 Bpe15g00474 Bpe-Chr15:16079990 3.68E-77 dispersed
Bpe13g00376 Bpe-Chr13:11509407 Bpe10g00159 Bpe-Chr10:3831886 1.03E-79 transposed
Bpe10g00159 Bpe-Chr10:3831886 Bpe13g00412 Bpe-Chr13:11815395 6.77E-53 wgd
Bpe10g00159 Bpe-Chr10:3831886 Bpe02g01730 Bpe-Chr2:19741008 3.48E-93 wgd
Bpe10g00159 Bpe-Chr10:3831886 Bpe02g00343 Bpe-Chr2:2249606 7.18E-39 wgd
Bpe10g00159 Bpe-Chr10:3831886 Bpe04g00250 Bpe-Chr4:1672685 4.10E-99 wgd
Bpe10g00159 Bpe-Chr10:3831886 Bpe06g00130 Bpe-Chr6:2250709 7.39E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00159 - - csv:101222295 408.683