Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00171 CTCCGGCGCCAGATGAGTCTAAATGCCCTGCCTTCTGCTCTTTCCTCTGACGAAGCCTCGCCGGAGTGGCTTAGCAAAGCAGACAACGCGTGGCAACTTACAGCAACCACCATGGTCGGCCTCCAAAGCGTACCGGGGCTTGTCATTCTGTACGGAAGTATGGTGAAGAAAAAATGGGCCGTCAACTCCTCTTTCATGGCGCTTTACGCCTTCGCTGCAGTTCTCGTCTGCTGGGTTCTTTGGGCGCACAACATGGCCTTTGGGGACAAACTGATCCTCATTGTTGGTAAGCCCAATGTCGCCCTCTCAGAAACCCGTCTTCTCCGACAAACCCAGCTGAAGTTTGCAAATTACAAGGTGCCAATGGCTGACTTTGTGTTTTTCCAATTTGCTTTCGCCGCCATTACCGTCATATTGCTAGCCGGCTCGTTGTTGGGGAGGATGAAGTTTCTTGCGTGGATGATGTTCGTCCCTCTTTGGATCACCTTTTGCTATACAGTCGGCGCCTTCAGCATCTGGGGAAATGGTTTTGGAGAGAAAATCATCATTGATTATGCAGGCGGATATGTCATTCATCTCTCTTCAGGAGTTGCAGGTTTCACCGCTGCTTACTGGGTGGGTCCGAGAAGCGTAGACGACAGGCAGCACTTCCCACCAAACAACATAGTTCATGTGCTTGGAGGCGCCGGATTCTTATGGCTGGGTTGGACTGGTTTCAATGGAGGATCCCCGTTTGCTGCGAGTACCGTCACATCTTTGGCCGTTTGTAACACACATCTCTGCACTGCTACCAGTATCTTGATATGGATGTCTTTGGACATGATCGTCTACAAGAAAATCTCTGTGATTGGAGCGGTTCAAGGGATGATCACCGGCCTCGTTTGCATCACCCCCGGCGCTGGACTGGTGGATCCTGCTGCGGCGGCGGTAATGGGGGTTTTATCAGGTTCGGTGCCGTGGTACACGATGATGATTTTACACAGAAGATTGGACTTCTTCCAGAGCGTAGATGACACTTTAGGGGTTTTCCACACTCATGCGGTGGCCGGAGCTTTGGGAGGACTACTCACCGGCTGCTTGGCCAGACCTAATCTTCTCCATCTGATGTACGGCGATAACGAATACGGTCCAGGAATCGTGTACGCCATGTTCGACGGACGGTTCAGAAAAGGTTTGAAACAGTTTGGGTTCCAGGTGAGCGGATTATTGTTCATCGCGGTCTGGAACGTCATTGGAACGAGCTTGATCTGTATTTTTATAAGACGGGTCGTGAGTCTGAGGATGGAGGAAGAAGAGCTCAAGATAGGGGACGACGCTGTTCATGGAGAAGAAGCTTACGCTGTGTGGGGAGACGGGGACGGAATATCATCCACCATTCGTCTTCGCCCTTCGCGAGTACCTTCTGTAAGCCGCGGAGATGAT 1422 51.55 LRRQMSLNALPSALSSDEASPEWLSKADNAWQLTATTMVGLQSVPGLVILYGSMVKKKWAVNSSFMALYAFAAVLVCWVLWAHNMAFGDKLILIVGKPNVALSETRLLRQTQLKFANYKVPMADFVFFQFAFAAITVILLAGSLLGRMKFLAWMMFVPLWITFCYTVGAFSIWGNGFGEKIIIDYAGGYVIHLSSGVAGFTAAYWVGPRSVDDRQHFPPNNIVHVLGGAGFLWLGWTGFNGGSPFAASTVTSLAVCNTHLCTATSILIWMSLDMIVYKKISVIGAVQGMITGLVCITPGAGLVDPAAAAVMGVLSGSVPWYTMMILHRRLDFFQSVDDTLGVFHTHAVAGALGGLLTGCLARPNLLHLMYGDNEYGPGIVYAMFDGRFRKGLKQFGFQVSGLLFIAVWNVIGTSLICIFIRRVVSLRMEEEELKIGDDAVHGEEAYAVWGDGDGISSTIRLRPSRVPSVSRGDD 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4225444 4227094 - Bpe024647 Bpe10g00171 109293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00171 474 Gene3D Ammonium transporter AmtB like domains 7 449 IPR029020 -
Bpe10g00171 474 PANTHER AMMONIUM TRANSPORTER 7 470 - -
Bpe10g00171 474 ProSitePatterns Ammonium transporters signature. 184 209 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bpe10g00171 474 PANTHER AMMONIUM TRANSPORTER MEP2 7 470 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bpe10g00171 474 SUPERFAMILY Ammonium transporter 23 427 - -
Bpe10g00171 474 TIGRFAM amt: ammonium transporter 28 446 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bpe10g00171 474 PRINTS Rhesus blood group protein signature 223 241 IPR002229 GO:0005887
Bpe10g00171 474 PRINTS Rhesus blood group protein signature 129 145 IPR002229 GO:0005887
Bpe10g00171 474 PRINTS Rhesus blood group protein signature 254 276 IPR002229 GO:0005887
Bpe10g00171 474 Pfam Ammonium Transporter Family 30 446 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00171 Bpe-Chr10:4225444 Bpe10g00387 Bpe-Chr10:11449973 0 dispersed
Bpe10g00171 Bpe-Chr10:4225444 Bpe13g00701 Bpe-Chr13:13612559 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00171 K03320 - zju:107406851 694.115