Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00180 ATGGAAAACCTTCAAAACTCCTACATGGAAAGCCAGATTTCTTCTGACCTACTATTGGGTCTTATCACTGGACTCCATGGAAGCATTTCGAAGCTCGAGTGTCTTCGACCTTCAAAGCAGGTTAATACCCTCTTCACGAACCTCGTCAATCTTTGCATTCTTCCATCCTCCATCGACGTTAGGACATTGCCGGAAGAAGATCAGATCATGCGCAGACAGCTCATTTGTCTCTGCGGAAAAGCCGAGGGGCTTTTAGAGCTCGAGTTCTCAAACTTCCTCACCAAAATACCACAACCCTTAAACAACCTCAACCTGTTCCCTTACTATGGAAACTATGTCAAGCTAGCAAACCTAGAGTATAGAATTTTAAGGGAACAAGGGGTGGTTGATCCCAAAAAAGTTGCCTTCATTGGTTCTGGTTCAATGCCTCTAACATCGATCATAATGGCTACCCAGCACATGAAATTCACTAATTTTGATAATTTTGACATCGACAAGAGCGCGAATGATGAGGCCCGACAAATAGTAGCTTCTGATGTTGAGCTTAAGGTGAGGATGAAGTTCTACACGAGAGACATACTTGACGTAAGAGAGCAACTTGGTGAGTATGACTGCATTTTCTTGGCCGCACTCGTAGGGATGAACAAAGACGAGAAGAAGAAGATTTTAGGGCATGTGAGCAAATACATGAAAAAAGGAGGAATTTTGCTGGTAAGAAGTGCAAATGGTGCTAGAGCTTTTTTGTACCCTATAGTTGATGAGGATGATTTGGTGGGTTTTCAACTTCTCTCCATTTTTCATCCAACTGATGATGTTGTCAACTCAGTGATTCTGGTTCAGAAGCCATAA 849 42.64 MENLQNSYMESQISSDLLLGLITGLHGSISKLECLRPSKQVNTLFTNLVNLCILPSSIDVRTLPEEDQIMRRQLICLCGKAEGLLELEFSNFLTKIPQPLNNLNLFPYYGNYVKLANLEYRILREQGVVDPKKVAFIGSGSMPLTSIIMATQHMKFTNFDNFDIDKSANDEARQIVASDVELKVRMKFYTRDILDVREQLGEYDCIFLAALVGMNKDEKKKILGHVSKYMKKGGILLVRSANGARAFLYPIVDEDDLVGFQLLSIFHPTDDVVNSVILVQKP 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4939989 4940837 - Bpe002495.1 Bpe10g00180 109302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00180 282 Gene3D Vaccinia Virus protein VP39 24 282 IPR029063 -
Bpe10g00180 282 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 282 IPR004298 GO:0030410|GO:0030418
Bpe10g00180 282 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 242 IPR029063 -
Bpe10g00180 282 PANTHER NICOTIANAMINE SYNTHASE 4 282 - -
Bpe10g00180 282 CDD AdoMet_MTases 162 238 - -
Bpe10g00180 282 Pfam Nicotianamine synthase protein 15 281 IPR004298 GO:0030410|GO:0030418
Bpe10g00180 282 PANTHER NICOTIANAMINE SYNTHASE 3 4 282 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00689 Bpe-Chr8:7980804 Bpe10g00180 Bpe-Chr10:4939989 3.56E-167 dispersed
Bpe10g00180 Bpe-Chr10:4939989 Bpe11g01413 Bpe-Chr11:10515122 1.81E-91 dispersed
Bpe10g00180 Bpe-Chr10:4939989 Bpe11g01412 Bpe-Chr11:10510840 1.10E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00180 K05953 - pop:18098035 417.157