Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00236 ATGTTGACGGCCATAGATCTATCTCAGAACAGCTTGTTTGGCCCCATTTCAGACGCTTCTAACCTCGGTTCTTGCTTAAATTTGAAGATTCTAAACCTGTCGTCCAATTTCTTTGATTTTACAGTGAAGGATGCTACCGGATTGAAGCTCGATTTGCAGGTTCTCGATTTTTCTTTCAACAAAATCGCTGGTTCAAACGTGATGCCTTGGATTTTATCCGCTGGTTGCGGCGAAATGCAACACTTGGCGATAAAGGGCAACAAAATCGGCGGTGAAATTAATTTCGAATCGTGCAAGAATTTGGAGTACTTGGATATCTCCTCCAATAATTTCTCCGAGATTATTCCTTCCTTCGGAGATTGCTCCTTTTTGGAACACCTTGACATCTCCGGCAACAAGTTTTCCGGCGACGTTGGAGGAGTTCTCTCTGGTTGTAACCAGCTCAGCTTCCTTAATCTCTCCTCCAACCAGCTTTCCGGACAAATCCCGGCGTTTTCTTCTCGGGGCTTAAGGTTTCTCTCGCTTTCCAGCAACCATTTCCAAGGCCAGATTCCGCCGCATCTTTCTGATTTCTGCTCTAATTTGATAGAGCTGGACCTCTCGATGAATAACTTAACCGGCGGAGTTCCTTCGGCTCTGAGTTCTTGTTCTTCTCTTCAGTTTTTTGATATTTCGAGTAATCATTTGTCTGGTCAATTACCCATTTCTGCTTTCACTTCCATGGTTAGCTTGAAGGTGCTTTCTCTGTCCGACAATCAATTTTCCGGCGAGCTGCCGGATTCTCTTTCTAATCTCACCAGCTTGGAGACTTTGGATCTGAGTTCGAATAATTTTTCTGGGTTGATTCCATCGATGCTTTGTCAAATCTCCGGCAACAACTTAAAGGAGCTGTTTCTTCAAAATAATCTTTTAATGGGTTCCATTCCAGCGACTCTGAGCAACTGTTCTCAGCTCGTTTCCCTCGATTTGAGTTTCAATTTTCTCACCGGAGCTATCCCTTCGAGCATAGGCTTTCTCTATAAGCTCCAGAATCTGATTATTTGGTTGAATCAGCTTGAGGGAGAAATCCCAGAGGAGCTCATGTTCATTCAGGCCCTTGAGAATCTGATTCTCGATTTCAATTTTCTTACCGGAACTATTCCCTCTGGCCTAAGCAACTGCACCAACCTTAATTGGATTTCCCTATCTAACAACCAGTTGAGCGGCGAGATTCCAGCGTGGATAGGCGGCCTTCCAACCTTAGCCATACTCAAACTAAGCAACAATTCGTTCTCTGGGAGGATCCCACCGGCATTAGGGGATTGTCGGAGCTTGATATGGTTGGACCTCAACACCAACTTCTTAAACGGGATGATTCCACCGGAGCTTTTCAAGCAATCTGGCAACATTGCCGTCAACTTTATCACTGGCAAATCCTATGCGTACATCAAAACTGATGGGAGCAAGGAGTGTCACGGCGCTGGAAGTTTGCTGGAATTTGCCGGAATCCGGCAAGAACAAGTGAACAGAATCTCAAAGAGAAGTCCCTGCACCTTTACCAGAGTTTATAGAGGTATCACCCAGTCCACATTTAATAACAATGGCTCCATGATTTTTCTTGATATTTCTTATAACATGTTATCTGGTAGTATTCCCAAAGAAATTGGCTCTACAAATTATCTTTACATTCTGAATTTGGGCCATAACAATCTCTCTGGTACAATTCCTCAAGAACTCGGAAACCTCAGGAGTCTTAACATTCTTGATCTTTCTAGCAACAGACTGGAAGGGTCGATTCCGCTATCTTTGACTGGCCTTTCCTTGCTCATCGAGATTAATTTGTCTAATAATCTCTTGAACGGAACCATACCAGAATCTGGCCAGTTTGAAACCTTTCCAGCGACTGGGTTTTTGAACAACTCCGGCCTCTGTGGGTACCCTTTACCTAAATGCGGGGGTGATTCTGACTCGAGCTTGGATTCTCAACACGAGAAGTCCCACCGGAGACAATCTTCACTCGCCGGAAGTGTGGCAATGGGGTTATTATTTTCACTTTTCTGCATATTTGGATTGCTCATAGTTGCCATAGAAACTCGGAAGAGAAGGAATAAGAAGGATTCGACCCACGATATTTATGTGGACAGCCATTCGCATTCGGGTGCTGCAAATCCAAGCTGGAAGTTCACCAGCACCAGAGAAGCATCAAGCATAAATCTAGCTACTTTCGAGAAACCCTTACGGAATCTCACATTTGCAGACCTGCTCGAGGCCACTAATGGCTTCCACAATGACAGTCTCGTAGGGTCGGGAGGATTTGGTGATGTCTACAAAGCTCAGTTGAAGGATGGAAGTGTTGTGGCCATAAAAAAACTGATCCATGTAAGTGGGCAAGGGGATAGAGAATTCACTGCTGAAATGGAAACGATCGGAATAATAAAGCACAGAAATCTTGTACCCCTTCTCGGATATTGCAAGGTTGGCGAAGAACGCCTTCTGGTTTACGAGTTCATGAAATTCGGAAGCTTAGAAGACGTTTTACACGACCAGAAGAAGTCAGGAATGAAGCTGAATTGGGCTGTGAGGAGGAAGATAGCCATTGGAGCTGCCAGAGGACTGGCTTTTCTTCACCACAGTGTCAATCCCCACATAATTCATCGCGATATGAAGTCGAGCAATGTTCTGCTTGATGAAAACTTGGAAGCTCGGGTCTCCGACTTCGGAATGGCGAGGCTGATGAGTGTGATGGACACCCATTTGAGCGTCAGCACCCTCGCCGGAACTCCTGGCTATGTCCCGCCAGAGTACTACCAGAGCTTCCGGTGCTCCACGAAAGGCGATGTCTATAGCTACGGAGTCGTTCTGCTTGAGCTTCTCACCGGAAAACGGCCGACCGACTCGATAGATTTTGGTGATAACAATCTCGTTGGGTGGGTGAAAATGCACGCGAAATTGAAAATAAGTGACGTGTTTGATCCGGAGCTCATGAGAGAGGATCCGAGCCTCGAAATTGAGCTCTTGCAGCATTTGAAGGTGGCGTGTGCTTGCCTGGACGACCGGCCGTGGAGGCGGCCAACGATGATTCAGGTGATGGCTATGTTTAAGGAAATTCAGGCAGGGCCGGGGATCGATTCTCAGTCGATTATTTCCTCTGGCCACAGAGGATTCAGTGGGGTCGATGGGGTGGAAATGAGTATAAAAGAAGCCCCAGAACTCAGCAAGCAGTAG 3204 46.0 MLTAIDLSQNSLFGPISDASNLGSCLNLKILNLSSNFFDFTVKDATGLKLDLQVLDFSFNKIAGSNVMPWILSAGCGEMQHLAIKGNKIGGEINFESCKNLEYLDISSNNFSEIIPSFGDCSFLEHLDISGNKFSGDVGGVLSGCNQLSFLNLSSNQLSGQIPAFSSRGLRFLSLSSNHFQGQIPPHLSDFCSNLIELDLSMNNLTGGVPSALSSCSSLQFFDISSNHLSGQLPISAFTSMVSLKVLSLSDNQFSGELPDSLSNLTSLETLDLSSNNFSGLIPSMLCQISGNNLKELFLQNNLLMGSIPATLSNCSQLVSLDLSFNFLTGAIPSSIGFLYKLQNLIIWLNQLEGEIPEELMFIQALENLILDFNFLTGTIPSGLSNCTNLNWISLSNNQLSGEIPAWIGGLPTLAILKLSNNSFSGRIPPALGDCRSLIWLDLNTNFLNGMIPPELFKQSGNIAVNFITGKSYAYIKTDGSKECHGAGSLLEFAGIRQEQVNRISKRSPCTFTRVYRGITQSTFNNNGSMIFLDISYNMLSGSIPKEIGSTNYLYILNLGHNNLSGTIPQELGNLRSLNILDLSSNRLEGSIPLSLTGLSLLIEINLSNNLLNGTIPESGQFETFPATGFLNNSGLCGYPLPKCGGDSDSSLDSQHEKSHRRQSSLAGSVAMGLLFSLFCIFGLLIVAIETRKRRNKKDSTHDIYVDSHSHSGAANPSWKFTSTREASSINLATFEKPLRNLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGIIKHRNLVPLLGYCKVGEERLLVYEFMKFGSLEDVLHDQKKSGMKLNWAVRRKIAIGAARGLAFLHHSVNPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSVMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSIDFGDNNLVGWVKMHAKLKISDVFDPELMREDPSLEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGPGIDSQSIISSGHRGFSGVDGVEMSIKEAPELSKQ 1067
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8793021 8796224 - Bpe002568.1 Bpe10g00236 109358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00236 1067 Pfam Leucine rich repeat 169 229 IPR001611 GO:0005515
Bpe10g00236 1067 Pfam Leucine rich repeat 365 423 IPR001611 GO:0005515
Bpe10g00236 1067 Pfam Leucine rich repeat 100 158 IPR001611 GO:0005515
Bpe10g00236 1067 Pfam Leucine rich repeat 233 278 IPR001611 GO:0005515
Bpe10g00236 1067 ProSitePatterns Protein kinases ATP-binding region signature. 760 783 IPR017441 GO:0005524
Bpe10g00236 1067 SMART serkin_6 754 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00236 1067 Pfam Leucine Rich Repeat 318 339 IPR001611 GO:0005515
Bpe10g00236 1067 SUPERFAMILY L domain-like 519 641 - -
Bpe10g00236 1067 Pfam Protein kinase domain 754 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00236 1067 Pfam Brassinosteroid receptor island domain 461 525 IPR045381 -
Bpe10g00236 1067 ProSitePatterns Serine/Threonine protein kinases active-site signature. 876 888 IPR008271 GO:0004672|GO:0006468
Bpe10g00236 1067 PANTHER SYSTEMIN RECEPTOR SR160 1 1041 - -
Bpe10g00236 1067 ProSiteProfiles Protein kinase domain profile. 754 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00236 1067 PRINTS Leucine-rich repeat signature 575 588 - -
Bpe10g00236 1067 PRINTS Leucine-rich repeat signature 268 281 - -
Bpe10g00236 1067 Gene3D Transferase(Phosphotransferase) domain 1 830 1031 - -
Bpe10g00236 1067 SUPERFAMILY L domain-like 2 188 - -
Bpe10g00236 1067 Gene3D Ribonuclease Inhibitor 2 644 IPR032675 -
Bpe10g00236 1067 Gene3D - 466 526 - -
Bpe10g00236 1067 CDD STKc_IRAK 760 1029 - -
Bpe10g00236 1067 MobiDBLite consensus disorder prediction 699 719 - -
Bpe10g00236 1067 SUPERFAMILY Protein kinase-like (PK-like) 731 1026 IPR011009 -
Bpe10g00236 1067 ProSiteProfiles Leucine-rich repeat profile. 267 288 IPR001611 GO:0005515
Bpe10g00236 1067 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 1041 - -
Bpe10g00236 1067 SUPERFAMILY RNI-like 141 455 - -
Bpe10g00236 1067 Gene3D Phosphorylase Kinase; domain 1 715 829 - -
Bpe10g00236 1067 SMART LRR_typ_2 411 435 IPR003591 -
Bpe10g00236 1067 SMART LRR_typ_2 575 599 IPR003591 -
Bpe10g00236 1067 SMART LRR_typ_2 241 264 IPR003591 -
Bpe10g00236 1067 SMART LRR_typ_2 98 121 IPR003591 -
Bpe10g00236 1067 SMART LRR_typ_2 265 288 IPR003591 -
Bpe10g00236 1067 SMART LRR_typ_2 363 387 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00288 Bpe-Chr6:13933085 Bpe10g00236 Bpe-Chr10:8793021 0 dispersed
Bpe10g00236 Bpe-Chr10:8793021 Bpe13g00995 Bpe-Chr13:15696103 9.39E-31 dispersed
Bpe10g00236 Bpe-Chr10:8793021 Bpe04g01056 Bpe-Chr4:7837449 1.97E-43 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63523 PF00069 Pkinase 1.60E-43 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00236 K13415 - csv:101209118 1633.23