Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00246 ATGGGTTCGAAAAAGCCTTATTTTGCTGTAGTTTTGATACAAACATCATTTGCTGGCATGAGTTTGCTCTCTAAAGCTGCCTTTGATGGAGGCATGAGTCCTTTTGTCTTTCTCTTCTACAGACAAGCCATTGGAACCCTCTTCTTAGTCCCCCTCTCTTTGTTTTGCGAAAGAAAATCTCGACCGCCACTTAGTTTCGTGTCCTTCTGCAAAATTTTCATGCTTGCATTTCTTGGGATAGCCATTGGATTGAATGCTTACGGAGTTGGTGTTAATTTGACTTCTGCAACTTTGGGGGCTGCCGCCTTTAATTGTCTTCCTGTTACCACCTTCTTCTTTGCTCTTTTACTTGGAATGGAGAAGGTGAGCGTAAGTAAGGCATCAGGAATGGCAAAAATGGCGGGGATCGTCTTGTGCATTACAGGTGTGGCGATCTTGACTTTTTACAAGGGACCTCATTTGAAACCATTGTTTCATAATCAGCTTCGCCATCATCCCTTCCAATCTTCTTCTTCTTCTTCTTCTTCTAACCTAAAATGGATCATCGGTTGTTTTCTTCTGGTTATCTCCAGTGTTTCTTGGGGACTATGGCTTGTTCTTCAGGCACAGTTTCTGAAAACATATCCATCTCCGCTTTCTTTCACTTCTCTGCAAATAATTTCAAGCGCAGTTCAATCGTTGTTCGTCGCCATTGCGTTTGAACGAGACCCAGCTCAGTGGAAATTGGGTTTTAATATCAGATTACTCGCCGTGGTTTACTGTGGGATAATGGTGACCTGTTTTGCAAACTTCTTGCAAAGCTGGGTGATCAAAGTGAAGGGGCCTGTCTTCCAAGCTGTGTCAACGCCATTGAACTTGGTTGTCACCATGACTGGTTCATTGCTTCTCTTAGGTGAGAGCATTTGTGTGGGAAGCATTATGGGAGCAGTGATGTTGGTGGGGAGCCTCTATAGTGTCCTATGGGGGAAATGCGAAGAACAGAAGAGCAATGAAAGAGAGGATGCTTCAGTAGGAAATGAAAGTGAAAGGCAGAAAGAGACGAGCAACCCATAA 1053 43.78 MGSKKPYFAVVLIQTSFAGMSLLSKAAFDGGMSPFVFLFYRQAIGTLFLVPLSLFCERKSRPPLSFVSFCKIFMLAFLGIAIGLNAYGVGVNLTSATLGAAAFNCLPVTTFFFALLLGMEKVSVSKASGMAKMAGIVLCITGVAILTFYKGPHLKPLFHNQLRHHPFQSSSSSSSSNLKWIIGCFLLVISSVSWGLWLVLQAQFLKTYPSPLSFTSLQIISSAVQSLFVAIAFERDPAQWKLGFNIRLLAVVYCGIMVTCFANFLQSWVIKVKGPVFQAVSTPLNLVVTMTGSLLLLGESICVGSIMGAVMLVGSLYSVLWGKCEEQKSNEREDASVGNESERQKETSNP 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9161767 9164415 - Bpe002580.1 Bpe10g00246 109368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00246 350 PANTHER WAT1-RELATED PROTEIN 5 334 IPR030184 GO:0016021|GO:0022857
Bpe10g00246 350 Pfam EamA-like transporter family 6 147 IPR000620 GO:0016020|GO:0016021
Bpe10g00246 350 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Bpe10g00246 350 PANTHER WAT1-RELATED PROTEIN 5 334 - -
Bpe10g00246 350 MobiDBLite consensus disorder prediction 327 350 - -
Bpe10g00246 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00246 Bpe-Chr10:9161767 Bpe10g00249 Bpe-Chr10:9250941 0 dispersed
Bpe10g00245 Bpe-Chr10:9090358 Bpe10g00246 Bpe-Chr10:9161767 2.40E-123 tandem
Bpe10g00246 Bpe-Chr10:9161767 Bpe10g00247 Bpe-Chr10:9226262 5.19E-168 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00246 - - csv:101219744 417.542