Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00249 ATGGGTTCAAAAAAGCCTTACTTAGCTGTGATTTTGATACAAATTTCATTTGCTGGCATGAGTTTGCTCTCCAAAGCTGCCTTTGCTGCAGGGATGAGCCCTTACGTCTTTCTCTTCTACAGACAAGCTATAGGAACCCTGTTCTTAGTGCCTCTCTCTTTGTTCTGCGAAAGAAAATCTAGACCCCGACTTAGTTTCTGGGCTTTCTGCAAAATTTTCATACTGGCTTTTCTTGGGATAACTCTTGGACTGAATGCTTATGGAGTTGGTGTTAGTTTGACTTCTGCAACTTTGGGTGCAGCTGCCTTTAACGTTCTTCCTGTTACTACCTTCTTCTTTGCTCTTTTGCTTGGGTTTGAGACGGTGAGCCTAAGAACTGTTTCGGGAGTGGCAAAGGTGGCTGGGGTTGTCGTGTGCATTGCAGGTGTGACGATCATGACTTTTTATAAGGGCCCACATTTGAAACCATTCTTCCATAGTCAGCTTTTTCATCATCAATCTCAATCATCTTCTTCTTCCTCTTCTTCGACCCAAAAATGGATCATCGGTTGTTTTCTTCTGGTTATCTCCAGTGTTTCTTGGGGTCTATGGCTTGTTCTTCAGGCACAGTTTCTGAAGACATATCCATCTACGCTTTCTTTCACTTCTCTGCAAATATTTTCAAGCGCAGTTCAATCATTTGTCGTCGCCATAGCATTTGAACGAGACCCAGCTCAGTGGAAACTGGGTTTCAATATCAGATTACTCGCCGTGGTTTACTGTGGGATAATTGTGACTTGTTTTGCAAATTTTCTGCAAAGCTGGGTGATCAAAGTGAAGGGTCCTGTCTTCCAAGCTGTGTCAACGCCATTGAACTTGGTCGTCACCATGATTGGCTCCCTACTTCTCTTAAGTGAGAGCATTTCTGTGGGAAGTGTTATGGGAGCAGTGATGCTGGTGGGGAGCCTTTACAGTGTTCTGTGGGGGAAAAGCAAAGAGCAGAACAGCAATGAAAGTGAAGATGTTTCAGCAGAAAATGAAAGTAAAGAGATAAGAAATGACGAAGCAAAAATAGTGGATGAAGTTTGA 1068 43.16 MGSKKPYLAVILIQISFAGMSLLSKAAFAAGMSPYVFLFYRQAIGTLFLVPLSLFCERKSRPRLSFWAFCKIFILAFLGITLGLNAYGVGVSLTSATLGAAAFNVLPVTTFFFALLLGFETVSLRTVSGVAKVAGVVVCIAGVTIMTFYKGPHLKPFFHSQLFHHQSQSSSSSSSSTQKWIIGCFLLVISSVSWGLWLVLQAQFLKTYPSTLSFTSLQIFSSAVQSFVVAIAFERDPAQWKLGFNIRLLAVVYCGIIVTCFANFLQSWVIKVKGPVFQAVSTPLNLVVTMIGSLLLLSESISVGSVMGAVMLVGSLYSVLWGKSKEQNSNESEDVSAENESKEIRNDEAKIVDEV 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9250941 9252671 - Bpe002584.1 Bpe10g00249 109371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00249 355 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Bpe10g00249 355 Pfam EamA-like transporter family 5 135 IPR000620 GO:0016020|GO:0016021
Bpe10g00249 355 PANTHER WAT1-RELATED PROTEIN 5 335 - -
Bpe10g00249 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 325 - -
Bpe10g00249 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Bpe10g00249 355 PANTHER WAT1-RELATED PROTEIN 5 335 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00245 Bpe-Chr10:9090358 Bpe10g00249 Bpe-Chr10:9250941 1.83E-107 dispersed
Bpe10g00246 Bpe-Chr10:9161767 Bpe10g00249 Bpe-Chr10:9250941 0 dispersed
Bpe10g00249 Bpe-Chr10:9250941 Bpe02g00072 Bpe-Chr2:562039 5.80E-79 dispersed
Bpe10g00247 Bpe-Chr10:9226262 Bpe10g00249 Bpe-Chr10:9250941 9.17E-161 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00249 - - csv:101219744 399.438