Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe10g00254 | ATGGAAGAACAGCTCCTCCACAGCCAAGTTCCTTTCGGTCATCATTCTCTTTTGCCCTATTTATATATTCCCGTTGATCAAATCCCGTACAATACCCCGCCGACCTTTCCTCATTTTAACTGTCAAGTGGCGAATTGTGTGAAGGGTGATGAACAAGAATCAGATCAAGATCTTGGTGCAATGAAGGAGATGATGTACAGAATTGCATCTATGCAGCCAGTGGACATTGACCCTGCCACCATCCCAAAGCCGAAACGGAAGAATGTTCGATTCAGTGATGACCCTCAGAGTGTAGCTGCCCGTTTACGAAGAGAGAAAATAAGCGAAAAAATGCGTATCCTCCAGCGTCTCGTCCCGGGAGGAACACGATTGGACAAGGCTACCATGCTAGATGAAGCAATTCGATACATCAAGTTCTTAAGACGACAAATCCGCTTGTTACAATCTAATTATCAACCTCAAAGCATTAACTTCAGCTTGGGTTCATCTTCCTCAACTCCAACGGATGGGTCTTTGAGAGCTAATGGAGGTGCAGCCTCCACTGAACCTGGACTTGGAAGCAGCACAGGAGGAAGAAAAATAGGCTACCTGAAGCATGAGGTAATTAACGATTGA | 615 | 45.37 | MEEQLLHSQVPFGHHSLLPYLYIPVDQIPYNTPPTFPHFNCQVANCVKGDEQESDQDLGAMKEMMYRIASMQPVDIDPATIPKPKRKNVRFSDDPQSVAARLRREKISEKMRILQRLVPGGTRLDKATMLDEAIRYIKFLRRQIRLLQSNYQPQSINFSLGSSSSTPTDGSLRANGGAASTEPGLGSSTGGRKIGYLKHEVIND | 204 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 9555078 | 9555692 | + | Bpe002588.1 | Bpe10g00254 | 109376 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe10g00254 | 204 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 49 | 166 | - | - | |
Bpe10g00254 | 204 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 49 | 166 | IPR045843 | GO:0003700|GO:0006355 | |
Bpe10g00254 | 204 | Gene3D | - | 95 | 157 | IPR036638 | GO:0046983 | |
Bpe10g00254 | 204 | Pfam | Helix-loop-helix DNA-binding domain | 101 | 140 | IPR011598 | GO:0046983 | |
Bpe10g00254 | 204 | MobiDBLite | consensus disorder prediction | 156 | 187 | - | - | |
Bpe10g00254 | 204 | Coils | Coil | 130 | 150 | - | - | |
Bpe10g00254 | 204 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 91 | 140 | IPR011598 | GO:0046983 | |
Bpe10g00254 | 204 | MobiDBLite | consensus disorder prediction | 156 | 192 | - | - | |
Bpe10g00254 | 204 | CDD | bHLH_AtIND_like | 92 | 150 | - | - | |
Bpe10g00254 | 204 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 96 | 153 | IPR036638 | GO:0046983 | |
Bpe10g00254 | 204 | SMART | finulus | 97 | 146 | IPR011598 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe06g00258 | Bpe10g00254 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe06g00258 | Bpe-Chr6:13313700 | Bpe10g00254 | Bpe-Chr10:9555078 | 3.89E-88 | dispersed | |
Bpe10g00254 | Bpe-Chr10:9555078 | Bpe10g00678 | Bpe-Chr10:13312033 | 4.01E-31 | dispersed | |
Bpe10g00254 | Bpe-Chr10:9555078 | Bpe04g00178 | Bpe-Chr4:1152051 | 3.92E-39 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21926 | PF00010 | HLH | 4.50E-08 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe10g00254 | - | - | pop:7479127 | 186.037 |