Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe10g00277 | ATGGGAAAGGAAGATTTGCTACAAAGTACTAACCATAGTGCGAGCAATGGTTGTTGCTCACATAATGATGTAACTGAAAGTAGAGATAGGGAGGCCAGGTCAGCAACATGTCGGGTGTGCCAATGTACAGAGTCTGATAAAAGAGGGGATGCTGTTTTAGGACTTTTGGGCATCACCCTTTCAGAAAGTAAAACCAATAAGAATGTGAAGCTTGACAGCCCTTTAAATGCTAAAAGCTCTCCCTCTAAGCAGAATGATGGAAAGGGATCTAGTGTAGTTGAGTTCATAGGTCCTGATGGTGAGGTTTTTGTTTGTAATGCTGATATAGAAATGGGTTCATGTCTCAGTCAAGATGAGTTGGTCGAACTTGGTTGTTCTTGCAAAAATGACCTTGCGCTTGTACACTATGCATGTGCTCTTAAGTGGTTTATCAGCCATGGATCTACTGTCTGTGAAATCTGTGGTTGTGTTGCAAAAAATATTAGAACAGCTGACTTTAGAAAGGTCGTGGCTTCCTTGAAGGAATATGAAGCCTTAAGAGAAAGGACTGCTAGTGGGGAACCCAATCCTGCTGGGCTGCATGATTCCGACACTAGTATTGATCCCGATGCAGTTGCTGCTATTCGCCGACAAAGACTTAGTGAAATATCCTCGTGGTTTAGTCCCCATAATCGTAATAACCATAACTATATGGCATTCTCGCAGGTTCTTTCTGAACTGCCTCTGAGTTCTGCTACAGGAGACGATGTTCCTGCTGAAAATGCAGCGACAAAGTGGGCTGTTGAATGTACTGGGATTCTTCTTGCAACAGGATTACTTACTGTTACTCTTGCTTGGCTCATAGCTCCTCATGTGGGAAAGAAAACAGCTAGCAGTGGTCTTCATATTCTTCTTGGAGGCATATGCGCTTTAACAGTTGTGGTTTTCTTTCGATTTGTAAGTGCCTGTTACAATTAA | 957 | 42.63 | MGKEDLLQSTNHSASNGCCSHNDVTESRDREARSATCRVCQCTESDKRGDAVLGLLGITLSESKTNKNVKLDSPLNAKSSPSKQNDGKGSSVVEFIGPDGEVFVCNADIEMGSCLSQDELVELGCSCKNDLALVHYACALKWFISHGSTVCEICGCVAKNIRTADFRKVVASLKEYEALRERTASGEPNPAGLHDSDTSIDPDAVAAIRRQRLSEISSWFSPHNRNNHNYMAFSQVLSELPLSSATGDDVPAENAATKWAVECTGILLATGLLTVTLAWLIAPHVGKKTASSGLHILLGGICALTVVVFFRFVSACYN | 318 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 10116558 | 10118489 | - | Bpe002613.1 | Bpe10g00277 | 109399 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe10g00277 | 318 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Bpe10g00277 | 318 | MobiDBLite | consensus disorder prediction | 70 | 91 | - | - | |
Bpe10g00277 | 318 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 103 | 161 | IPR011016 | GO:0008270 | |
Bpe10g00277 | 318 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 103 | 158 | IPR013083 | - | |
Bpe10g00277 | 318 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 19 | 312 | - | - | |
Bpe10g00277 | 318 | SUPERFAMILY | RING/U-box | 117 | 157 | - | - | |
Bpe10g00277 | 318 | SMART | ringv_2 | 114 | 155 | IPR011016 | GO:0008270 | |
Bpe10g00277 | 318 | Pfam | RING-variant domain | 118 | 154 | IPR011016 | GO:0008270 | |
Bpe10g00277 | 318 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Bpe10g00277 | 318 | MobiDBLite | consensus disorder prediction | 70 | 89 | - | - | |
Bpe10g00277 | 318 | PANTHER | ZINC FINGER, RING-CH-TYPE | 19 | 312 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe10g00277 | Bpe-Chr10:10116558 | Bpe08g01389 | Bpe-Chr8:14847294 | 3.73E-09 | dispersed | |
Bpe10g00277 | Bpe-Chr10:10116558 | Bpe04g01820 | Bpe-Chr4:23559370 | 6.86E-11 | transposed | |
Bpe10g00277 | Bpe-Chr10:10116558 | Bpe15g01136 | Bpe-Chr15:20375473 | 7.17E-11 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe10g00277 | - | - | pvy:116143051 | 409.453 |