Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe10g00280 | ATGCTCGACAGGTTAGCTGGTAGACAATTTTATTGCTTTTTGGATGGATATTCAGGTTATAATCAAATTACGATTGTGCCCGAAGATCAAGAGAAAACTACGTTTACATGCCCTTATGGAACTTTCGCATTTCGGAGAATGCCTTTCGGATCCATACCTTTTATTCTAATGTGTAATGTCAACGATTATGCAGTAGGAGTAATGCTGGGACAGAAGAAAGATAAATTATTCCATTCCATCTATTACGCCAGCAAAACACTCAATGATACACAGAAAAACTACACCACTGCAGAGAAAGAGCTACTTGCGGTAGTCTTTGCTTTCGATAAATTCAGGGTGTATTTGATAGGAACAAAGGTTATTGTGTACACTGATCATGCAGCCATCAAGTATCTAGTTACGAAAAAGGATGCAAAACCAAGACTACTTCGCTGGGTGTTACTTCTTCAAGAGTTTGATTTGGAAATCCGCGATAGAAAAGGGTGCGAGAATCAAGTTGCAGATCATTTATCTCGTCTGGAAAATGGGAACAAACAGCAACCTGGAGAAAGCATAAAAGAAACATTTCCAGATGAACAGCTGCTGAAAGCGGATGTATATTCAGTGCCATGGTATGCAGACTTTGGGAACTACATTTTGCTGCGGGAAATAACACATGAAAATGTTGTGAAGCTGGTGAACGTCCACATTAATCCCGCAGATATGTCCCTGTATCTGGCCTTTGATTACGCAGAACATGACCTCTATGAAATTATTAGACATCACAGGGACAAGGTCAACCATTCCATTAATCATTACACTGTAAAATCATTGTTGTGGCAGCTGCTTAATGGCCTGAACTATCTTCATAGTAATTGGATCATTCACCGTGATCTAAAGCCCTCAAATATTTTGGTTATGGGAGAGGGAGAAGAGCAGGGTATTGTTAAAATAGCTGATTTTGGCCTTGCGAGAATATACCAAGCCCCCCTTAAACCATTATTTGACAATGGGGTTGTTGTAACCATCTGGTATCGTGCTCCTGAGCTACTCCTAGGAGCAAAGCACTATACAAGTGCTGTTGATATGTGGGCTGTTGGGTGCATTTTTGCAGAGCTTTTGACACTGAAACCGCTCTTTCAAGGATCAGAAGTTAAAGGGACACCAAATCCTTTCCAGATATTATCTAATAATACTATTTTCCACATTAATGTTGTAGGCCATCCCACAATCGATAAGTGGCCAACACTTGCAAATCTTCCACATTGGCAACAAGATGTCAAACATATTCAAGGTCTTAAGTATGATAATGCTGGACTTTATAGTGTTGTTCATCTTTCTCCTAAAAGTCCCGCGTACGATCTCCTATCAAAGATGTTAGAATATGATCCCAGAAAACGTATAACGGCAGCACAAGCTCTGGATCATGAGTATCTCCCATTGACTATGGTAATGTGCAGTGCCTTGGTGCCCAACCAACCTGGGGAGAAGATTGTAAATTACCCTACTCGTCCTGTAGACACAACTGCTGATTTTGAGGGAACAACAAGCCTTCAACCCACTCAATCGGTATCATCGGGAAATCAAGTTTCTGGGAATGTGCAGGGTGCTCATGTAGTGGCAAACAGGTCTGTCCCTCGGGCTATGTCCATGGTTGCCATGCAGAGGATGCAATCTCAAGGCATGACTCAAGGCATGACGGCTTATAATCTTGCATCTCAGGCTGGGATGGGTGGTGGTATGAATCCTAGCGGCATTCCAATGCAACGTGGTGTTTCTGCTCAGACCCACCAGCAACAACAGCAGTTGAGGCGCAAAGACCCCGGAATGGGGATACCTGGATACCCACCACAGCAGAAATCAAGACGCATGTGA | 1854 | 42.61 | MLDRLAGRQFYCFLDGYSGYNQITIVPEDQEKTTFTCPYGTFAFRRMPFGSIPFILMCNVNDYAVGVMLGQKKDKLFHSIYYASKTLNDTQKNYTTAEKELLAVVFAFDKFRVYLIGTKVIVYTDHAAIKYLVTKKDAKPRLLRWVLLLQEFDLEIRDRKGCENQVADHLSRLENGNKQQPGESIKETFPDEQLLKADVYSVPWYADFGNYILLREITHENVVKLVNVHINPADMSLYLAFDYAEHDLYEIIRHHRDKVNHSINHYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGIVKIADFGLARIYQAPLKPLFDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGSEVKGTPNPFQILSNNTIFHINVVGHPTIDKWPTLANLPHWQQDVKHIQGLKYDNAGLYSVVHLSPKSPAYDLLSKMLEYDPRKRITAAQALDHEYLPLTMVMCSALVPNQPGEKIVNYPTRPVDTTADFEGTTSLQPTQSVSSGNQVSGNVQGAHVVANRSVPRAMSMVAMQRMQSQGMTQGMTAYNLASQAGMGGGMNPSGIPMQRGVSAQTHQQQQQLRRKDPGMGIPGYPPQQKSRRM | 617 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 10134916 | 10156274 | - | Bpe002616.3 | Bpe10g00280 | 109402 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe10g00280 | 617 | SUPERFAMILY | DNA/RNA polymerases | 2 | 164 | IPR043502 | - | |
Bpe10g00280 | 617 | PANTHER | CYCLIN-DEPENDENT KINASE E-1 | 211 | 616 | - | - | |
Bpe10g00280 | 617 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 287 | 299 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe10g00280 | 617 | Gene3D | - | 1 | 20 | IPR043128 | - | |
Bpe10g00280 | 617 | SUPERFAMILY | Protein kinase-like (PK-like) | 212 | 472 | IPR011009 | - | |
Bpe10g00280 | 617 | Pfam | RNase H-like domain found in reverse transcriptase | 53 | 152 | IPR041373 | - | |
Bpe10g00280 | 617 | Gene3D | - | 55 | 123 | - | - | |
Bpe10g00280 | 617 | Gene3D | Transferase(Phosphotransferase) domain 1 | 244 | 472 | - | - | |
Bpe10g00280 | 617 | ProSiteProfiles | Protein kinase domain profile. | 108 | 472 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe10g00280 | 617 | MobiDBLite | consensus disorder prediction | 571 | 617 | - | - | |
Bpe10g00280 | 617 | Gene3D | Phosphorylase Kinase; domain 1 | 213 | 243 | - | - | |
Bpe10g00280 | 617 | SMART | serkin_6 | 110 | 472 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe10g00280 | 617 | Gene3D | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 21 | 50 | - | - | |
Bpe10g00280 | 617 | MobiDBLite | consensus disorder prediction | 581 | 598 | - | - | |
Bpe10g00280 | 617 | CDD | RNase_HI_RT_Ty3 | 55 | 173 | - | - | |
Bpe10g00280 | 617 | Pfam | Protein kinase domain | 213 | 472 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe10g00280 | 617 | PANTHER | CELL DIVISION PROTEIN KINASE | 211 | 616 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe10g00280 | Bpe-Chr10:10134916 | Bpe13g00523 | Bpe-Chr13:12528385 | 1.28E-51 | dispersed | |
Bpe12g00323 | Bpe-Chr12:6924187 | Bpe10g00280 | Bpe-Chr10:10134916 | 1.17E-26 | dispersed | |
Bpe10g00280 | Bpe-Chr10:10134916 | Bpe04g01919 | Bpe-Chr4:24144143 | 5.74E-51 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63526 | PF00069 | Pkinase | 1.60E-53 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe10g00280 | K02208 | - | csv:101203984 | 645.195 |