Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00328 ATGGCCATTTTCAAGCTTCTCTCGCTCTACATTTGCTTCTTCTTTCTGCCATTTTCGTCCTCTTCTTCTTCTACAGATGTTCAACTTGTACTGGGAAAAATCAAAGCTTCGCTGCAAGGTGACTCCCAAAACCTGCTTTTGTCTTCATGGAATACTTCCGTTCCTCTCTGCCAATGGCGTGGACTCAAATGGGTTTTCTCCGATGGCTCCCCTCTTCTCTGCGACGACCCTTCCCAACCCCAGTGGACCAACCTCACTCTCTTCAAGGACCCATCCGTTCATCTCCTTTCTCTGCAGCTTCCTGCTGCCAACCTTACTGGCTCGCTTCCTCCTGAGCTCGGTGAGTTCTCTTTCCTTCACAGCCTATTCCTCAGCATTAATTCTTTGACAGGAGCTATTCCTTTTGAAATTGGCTACGGTTCGTCTCTTTCTGAAATTGATTTGAGTAGTAATTTGTTGAGTACGGTTTTGCCTCCGTCAATTTGGAATCTCTGCGATAAGATTGTTTCAATTAGGGTTCATGGAAACTCACTATCTGGAGACATTCCACAACCTGCATTGCCTAATTCTACTTGCGCTCATCTTGAAGTATTGGACGTGAGTGACAATAAGTTTTCTGGAAATTTCCCTGAATTTATTACAAGTTTTCAGGGTCTTAAACAACTTGATCTTAGCGGAAACATGTTTTCTGGTTCTATTCCTGATGGTTTGTCCAAGTTAAGTCTTGAAAAATTAAACTTCTCACACAATAATTTCAGTGGAACCTTACCCGTATTTGGCAGTTCCAAATTTGGAGCAGAAGCTTTCGAGGGAAACAATCCCGGGCTTTGTGGGTCGCCTTTGAGAAGTTGTATCGGAAGTTCAGGACTGAGCTCCGGCGCCATCGCTGGAATTGTGATCGGATTGATGACCGGAACCGTGGTTTTAGCTTCACTGTCAATTGGGTATTTTCAGAACAAAAAACGAAAGAGCAGATCTGAGAAAAACCAAAGCAATGGAGGCCAGGGAAACGACGGAAAGCTGATTCAGTTTCAGGGCGGGGAGCAGTTGACATTAGAAGAAGTGTTGAACGCAACAGGACAAGTAATGGAGAAAACCAGCTATGGAACTGTGTATAAAGCCAAGCTTGCAGATGGGAGAGTGATTGCTTTGAGGTTGTTGAGAGAAGGTAGCTGCAAAGATAGAAGCTCCTGTTTATTGGCTATTAAGCAATTGGGAAGGATCCGCCATGAAAACTTGATTCCTTTGAGAGCTTTCTATCAGGGGAAGAGAGGGGAGAAGCTTCTAATCTATGACTATCTTCCTCAGAGAAATCTGCATGATCTTTTACATGAATCTACAGCAGGGAAACCAGCACTGAATTGGGCTCGAAGACATAAAATCGCCTTAGGCGTAGCTCGAGGACTAGCATTTCTTCATAGTCTTGAGACTCCAGTTACTCATGGCAATGTGCGATCTAAAAATGTGCTTGTCGACGAGTTTTTTGTTGCTCGGCTAACCGAGTTTGGCCTTGACAAGCTGATGATTCCTGCCGTTGCTGATGAAATCATCGCACTAGCAAAGACCGATGGATACAAGGCACCGGAGCTTCAAAAGATGAAGAAATGCAATTCAAGAACAGACGTATACGCGTTTGGAATATTCTTGTTGGAAATTTTGATAGGAAAAAAACCCGGAAAAGACGGGAGAAACAGGGAGTTTGTGGATTTGCCGTCGATGGTGAAAGTTGCAGTTCTAGAGGAGACGACAATGGAGGTTTTTGACATCGAGATTCTAAAGGGTATAAGAACTCCGATGGAAGACGGGTTGGTCCAGGCATTGAAGTTAGCGATGGGTTGTTGTGCTCCAGTTGCTTCAGTGAGGCCGGCAATGGATGAAGTGGTAAAGCAATTGGAAGAGAATAGACCAAGGAATAGGTCGGCACTGTATAGCCCGACTGAAACGAGAAGCGAAATTGGTACGCCTTTTTAA 1971 44.44 MAIFKLLSLYICFFFLPFSSSSSSTDVQLVLGKIKASLQGDSQNLLLSSWNTSVPLCQWRGLKWVFSDGSPLLCDDPSQPQWTNLTLFKDPSVHLLSLQLPAANLTGSLPPELGEFSFLHSLFLSINSLTGAIPFEIGYGSSLSEIDLSSNLLSTVLPPSIWNLCDKIVSIRVHGNSLSGDIPQPALPNSTCAHLEVLDVSDNKFSGNFPEFITSFQGLKQLDLSGNMFSGSIPDGLSKLSLEKLNFSHNNFSGTLPVFGSSKFGAEAFEGNNPGLCGSPLRSCIGSSGLSSGAIAGIVIGLMTGTVVLASLSIGYFQNKKRKSRSEKNQSNGGQGNDGKLIQFQGGEQLTLEEVLNATGQVMEKTSYGTVYKAKLADGRVIALRLLREGSCKDRSSCLLAIKQLGRIRHENLIPLRAFYQGKRGEKLLIYDYLPQRNLHDLLHESTAGKPALNWARRHKIALGVARGLAFLHSLETPVTHGNVRSKNVLVDEFFVARLTEFGLDKLMIPAVADEIIALAKTDGYKAPELQKMKKCNSRTDVYAFGIFLLEILIGKKPGKDGRNREFVDLPSMVKVAVLEETTMEVFDIEILKGIRTPMEDGLVQALKLAMGCCAPVASVRPAMDEVVKQLEENRPRNRSALYSPTETRSEIGTPF 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10789772 10792638 - Bpe024656 Bpe10g00328 109450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00328 656 ProSiteProfiles Protein kinase domain profile. 357 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00328 656 SUPERFAMILY Protein kinase-like (PK-like) 362 632 IPR011009 -
Bpe10g00328 656 Gene3D Ribonuclease Inhibitor 27 166 IPR032675 -
Bpe10g00328 656 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 6 656 - -
Bpe10g00328 656 Pfam Leucine rich repeat 194 252 IPR001611 GO:0005515
Bpe10g00328 656 Pfam Protein tyrosine and serine/threonine kinase 361 630 IPR001245 GO:0004672|GO:0006468
Bpe10g00328 656 Gene3D Transferase(Phosphotransferase) domain 1 434 649 - -
Bpe10g00328 656 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 6 656 - -
Bpe10g00328 656 SUPERFAMILY L domain-like 40 259 - -
Bpe10g00328 656 Gene3D Phosphorylase Kinase; domain 1 321 433 - -
Bpe10g00328 656 Gene3D Ribonuclease Inhibitor 167 286 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00328 Bpe-Chr10:10789772 Bpe03g00985 Bpe-Chr3:29399732 1.79E-15 dispersed
Bpe14g00347 Bpe-Chr14:3324913 Bpe10g00328 Bpe-Chr10:10789772 6.24E-20 dispersed
Bpe10g00328 Bpe-Chr10:10789772 Bpe04g01792 Bpe-Chr4:23413628 1.41E-13 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63527 PF07714 PK_Tyr_Ser-Thr 1.50E-25 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00328 - - tcc:18612830 1025.77