Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00338 ATGAACCTTCAGCAGTGTTTGTGGGGTGGCTTTGTCTTCTTCTGTATCTCCTGGGCTGTTTCTCTCTGCGATGAAGATGGTTTTTTGAGCTTATCCTGTGGTGGAACAACCATCTACGTCGATTCCTTCAACATTTCATGGCTTCCGGACTATGACTTCATATCGACGGGAAACACATCCGCCGTTGATTATGCAGAGACCACCCCTTCTTCTAGGGTTCCGATTCGTTTCTTCCCCAATCCACAGTCTCGAAATTGTTACAAATTACCCCTCAAAATGGACTCGTCGTCAGTTCTCATCAGAACCAAATTTCTGTACAAAAACTACGATCGACTCCAGAAGCCGCCATTGTTCTCCATTTCTCTCGGGACTGCCATTTTCAGCACAGTTGATCTCAGTTCTAACGATCCATGGACGGAAGAATTCGTCTGGCAGGTTAAAAAGGCAACCGTGTCACTGTGCTTCCATGCTATTCCTAGCGGTGGAGCTCCACTTCTTTCCTCTATTGAAGTCAGGCCGCTTTCTTATGGAGCGTACAAAGCCGGTTTGAGTTCAATTCAGTCTTTGAGGAAGAAATACAGAATCAACTGTGGTTATAATGACGGCTCGATTCGGTACCCTTTTGATCGATATGATCGGATATGGGATGCTGATACCGGATTTACGCCTTTTCATGTATCATCGGGATTTAGGGTTCATCAGGTTTTCAATTCTTCCGGTATAATGGAAAGTCCTCCTTCGGCTGTTCTTCAAACTGCAAGAATTTTAGCTAGAAAGGATCTGTTAACTTACTATTTTCCTCTCGACAAAACCAGAGACTATTTCATCGTCCTCTATTTTGCTGGAATTCTTCCTGTTTATCCTTCATTTGATGTGTTCATCAATGGAAAATCTCAGAAATCTAATTATTTGGTAAAAACATCAGATGTGAGTGCTCTGTATTTTACTCAGAAGGAAATCAAGAGCCTAAATATCACTCTTAAGACAGTCAAGTTCAATCCTCAGATCAACGCAATCGAAGTTTATCAGATCATCATCTTACCATCGGAAGTTTCTTCGACCACAGTTTCTGCTCTTCAGGTTATTCAGCTATCTACCGGCCTAGATCTCGGGTGGGAAGACGATCCGTGCTCTCCAAAAACATGGAATCATGTCGGATGTGAAGGAAGCCTTGTCACTGCGCTAGAGCTTTCCAACATCAATTTGAGGTCCATCAATCCAACATTTAGTGACTTATTGGATCTTAAAACACTGGATTTGCACAACGCATCGCTTAGGGGCGCAACAGAGAATTTGGATAGCTTACGAAATCTCGAAAAACTGAATCTGAGCTTCAACCAGCTAACATACTTTGGCTCAGATTTGGGCAACCTACGCAGCCTTCAAATTCTGGACTTGAAGGACAATTCTCTAGCTGGAGTAGTTCCTGAAAGCTTAGGACAACTAGAGGATCTTCACCTATTGAATTTGGAGAATAACAAGCTTCAAGGAACTCTCCCACAGTCTCTGAATAAAGATAGTTTGGAAGTCAGAACATCTGGAAATCTATGTCTTTCCTTCACAAAAGTGTCATGCAATGACGCCTCTTCAAACCCATCAATCGAGACCCCACTAGTAACTGTGATACCCGCTAAGAAGCACAATGCACTTAGTCATCTACCAATTGTTCTCGGAGCAGTTTCAGGGGCTTTTCTTGCAGTTATTACAATTTTTCTCTTCATCTTCGTACAAACGAGGAAAGATAGAACTGAAATGGCTAACTCAACAAAGGCAGCCATGACACTTCGGAGCTGGAATTCAGCTAAAGTTTTTTCCTACAAAGATATCAAAGCAGCAACAAAGAACTTCAAGGAGGTGATTGGGCGAGGAAGTTTTGGATCTGTTTATCTTGGAAAGCTTGCAGATGGGAGATCAGTAGCCGTGAAAGTGCGTTCAGATAAAAGCCAAATTGGTGCTGAATCATTTATCAATGAGGTGCATCTATTGTCGAGAATTCACCACCAGAATCTTGTTCGTTTGGAAGGATTTTGCCAGGAATCAAAGCAGCAAATACTAGTTTATGAGTATCTGCCTGGAGGATCCTTGGCTGACAACCTTTATGGAACCCAAAGCAAGAAGATTTCTCTGAGTTGGGTCCGTAGACTCAAAATTGCTGTTGATGCTGCAAAAGGATTGGATTATTTGCATAATGGAAGTGAACCAAGAATAATACATCGTGATGTCAAGTGCAGCAACATCCTCTGCGATGTCGAAATGAATGCAAAACTCTGCGACTTTGGTTTGTCTAAGCAAGTCATCCGAGCTGATGCAACACACGTTACAACTGTTGTTAAAGGAACGACCGGTTATCTTGATCCCGAATACTATTCCACTCAACAGCTTAGTGAAAAGAGTGATGTTTACAGCTTTGGAGTTGTTCTTCTGGAGCTCATCTGTGGAAGAGAACCATTGATTCATCATGGAAGTCCAGACTCCTTCAATTTGGTGTTATGGGCAAAGCCGTACTTACAGGCGGGTGCATTGGAGATTGTGGATGAGAGTTTAAGGGGAAGGTTTGATGTGGAGAGCATGAAAAAGGCAGCTCTAATTGCAGTGAAGTGTGTTGAAAGAGATGCTTCTCAGAGACCAACCATAGCTCAGGTTTTGACTCACCTCCAAGAAGCTTACACTATTCAGATTACTACTCGTGAACGCCCCTAG 2700 42.7 MNLQQCLWGGFVFFCISWAVSLCDEDGFLSLSCGGTTIYVDSFNISWLPDYDFISTGNTSAVDYAETTPSSRVPIRFFPNPQSRNCYKLPLKMDSSSVLIRTKFLYKNYDRLQKPPLFSISLGTAIFSTVDLSSNDPWTEEFVWQVKKATVSLCFHAIPSGGAPLLSSIEVRPLSYGAYKAGLSSIQSLRKKYRINCGYNDGSIRYPFDRYDRIWDADTGFTPFHVSSGFRVHQVFNSSGIMESPPSAVLQTARILARKDLLTYYFPLDKTRDYFIVLYFAGILPVYPSFDVFINGKSQKSNYLVKTSDVSALYFTQKEIKSLNITLKTVKFNPQINAIEVYQIIILPSEVSSTTVSALQVIQLSTGLDLGWEDDPCSPKTWNHVGCEGSLVTALELSNINLRSINPTFSDLLDLKTLDLHNASLRGATENLDSLRNLEKLNLSFNQLTYFGSDLGNLRSLQILDLKDNSLAGVVPESLGQLEDLHLLNLENNKLQGTLPQSLNKDSLEVRTSGNLCLSFTKVSCNDASSNPSIETPLVTVIPAKKHNALSHLPIVLGAVSGAFLAVITIFLFIFVQTRKDRTEMANSTKAAMTLRSWNSAKVFSYKDIKAATKNFKEVIGRGSFGSVYLGKLADGRSVAVKVRSDKSQIGAESFINEVHLLSRIHHQNLVRLEGFCQESKQQILVYEYLPGGSLADNLYGTQSKKISLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILCDVEMNAKLCDFGLSKQVIRADATHVTTVVKGTTGYLDPEYYSTQQLSEKSDVYSFGVVLLELICGREPLIHHGSPDSFNLVLWAKPYLQAGALEIVDESLRGRFDVESMKKAALIAVKCVERDASQRPTIAQVLTHLQEAYTIQITTRERP 899
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11003559 11008354 + Bpe002680.1 Bpe10g00338 109460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00338 899 CDD STKc_IRAK 620 887 - -
Bpe10g00338 899 Pfam Malectin-like domain 31 344 IPR024788 -
Bpe10g00338 899 SMART serkin_6 614 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00338 899 Gene3D - 191 345 - -
Bpe10g00338 899 PANTHER OS07G0107800 PROTEIN-RELATED 13 893 - -
Bpe10g00338 899 Gene3D Transferase(Phosphotransferase) domain 1 690 897 - -
Bpe10g00338 899 SUPERFAMILY Protein kinase-like (PK-like) 594 885 IPR011009 -
Bpe10g00338 899 SUPERFAMILY L domain-like 358 505 - -
Bpe10g00338 899 Pfam Protein kinase domain 617 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00338 899 Gene3D Ribonuclease Inhibitor 357 527 IPR032675 -
Bpe10g00338 899 ProSiteProfiles Leucine-rich repeat profile. 437 459 IPR001611 GO:0005515
Bpe10g00338 899 SMART LRR_typ_2 435 457 IPR003591 -
Bpe10g00338 899 SMART LRR_typ_2 482 506 IPR003591 -
Bpe10g00338 899 SMART LRR_typ_2 458 481 IPR003591 -
Bpe10g00338 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Bpe10g00338 899 ProSiteProfiles Protein kinase domain profile. 614 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00338 899 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Bpe10g00338 899 Gene3D Phosphorylase Kinase; domain 1 586 689 - -
Bpe10g00338 899 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 893 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00338 Bpe-Chr10:11003559 Bpe10g00773 Bpe-Chr10:13929343 1.29E-131 dispersed
Bpe10g00338 Bpe-Chr10:11003559 Bpe06g00759 Bpe-Chr6:17932640 3.01E-117 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63528 PF12819 Malectin_like 2.10E-54 CL0202 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00338 - - jre:108989040 1267.29