Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00365 ATGGACAATGAGCTTTTTTTCAACGGTGGACACCCCCCGTCCTCCCCCATCACGTTTGAGTCAACTTCTATAATGTCCGTTTGGCACCAGCTAGCTCCACCGCCCGATTGCTCGCCGGAGAAATCCTTGGACTCCTTTTTCGATCCTTTCTCATCTGTCGTCCCGTCGCCGGAGGCGTCCAATTCTTATGTTTCCAGCGAAGGGTTCAAGATTAGGGAGCTGATAGGGAGGCTCGGAGAATTTCCTAGTTACAACACTACTCCACTGAGCTCACCTCCGAAGCTTCATTCTCCAATAATGGCGGCGAATTCTAATGTAGCTGAATTCTCAAGTGATCCTGGATTTGCAGAGAGGGCGGCTAAGTTTTCTTGCTTGGGAAGTAAGAGTTTCAATGGTCGAACCAGTCAGTTTCCTTCTTATAGATCTACTCCATCAACGGCAGACGGAAAGCTTTCTCGAGTCTCAAGCAGCCCCTCTCTCAAAGCATTTGGATCGAACTCTTCGTTGGAATCCACGGTTTCAGAGCAAATCTCAAACGAGTTAAATTGCAGGAAAAGAAAAGCAAATTCAAAGGGAAAACCGAAAGAACCCATTCAGTTTGATGAGAATTCAAATGGTAAGCGGAGCAAAGTGAGCGAAGAGAAGAGGTGTGGAAATGTCGGCGGGAAAACAGAGGAAGAAGACGATGGAAAAAGTTGCAGAAACGAACAGAAACCAAGCAAGCCGAAGAGCAACTCTAAACCTCCAGAGCCTCCAAAAGACTACATCCATGTCAGAGCCAGAAGAGGCCAGGCCACTGACAGCCATAGCCTTGCAGAAAGAGTAAGAAGAGAGAAGATAAGCGAAAGAATGAAGCTTCTTCAAGACCTCGTTCCAGGCTGCAACAAAGTCACCGGAAAAGCGCTAATGCTCGACGAAATCATAAACTACGTTCAGTCATTACAGCGTCAAGTTGAGTTCCTTTCCATGAAGTTGGCTTCTGTCAACACCCGGACGGAATCCGCCATGGATTCTCTGATCTCCAAAGAAGTGTTTGAATCTAACAATTCTTTGTCAAATCCACTGTTTGGAAGTGATTCTTCACCATCTTCCATTTATGGCCATCATAATCTTGGCCTGCAATTACCTTTCATAAATGAAAATTTCAGTCAGTATCCAATGTTTGGAGAAGATAACTTGCAATCCATAGTTCAAATGGGAATTGGCCAATCTCAAACCAGAGAAGTAGCATCCAAGTTTCCTTTCTCTGTTCCGGGCATGGAAATCGAGCTCTAA 1275 45.49 MDNELFFNGGHPPSSPITFESTSIMSVWHQLAPPPDCSPEKSLDSFFDPFSSVVPSPEASNSYVSSEGFKIRELIGRLGEFPSYNTTPLSSPPKLHSPIMAANSNVAEFSSDPGFAERAAKFSCLGSKSFNGRTSQFPSYRSTPSTADGKLSRVSSSPSLKAFGSNSSLESTVSEQISNELNCRKRKANSKGKPKEPIQFDENSNGKRSKVSEEKRCGNVGGKTEEEDDGKSCRNEQKPSKPKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRTESAMDSLISKEVFESNNSLSNPLFGSDSSPSSIYGHHNLGLQLPFINENFSQYPMFGEDNLQSIVQMGIGQSQTREVASKFPFSVPGMEIEL 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11243759 11245517 - Bpe002708.1 Bpe10g00365 109487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00365 424 Gene3D - 261 338 IPR036638 GO:0046983
Bpe10g00365 424 MobiDBLite consensus disorder prediction 128 255 - -
Bpe10g00365 424 Pfam Helix-loop-helix DNA-binding domain 268 315 IPR011598 GO:0046983
Bpe10g00365 424 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 264 314 IPR011598 GO:0046983
Bpe10g00365 424 Coils Coil 311 331 - -
Bpe10g00365 424 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 262 330 IPR036638 GO:0046983
Bpe10g00365 424 SMART finulus 270 320 IPR011598 GO:0046983
Bpe10g00365 424 MobiDBLite consensus disorder prediction 128 179 - -
Bpe10g00365 424 CDD bHLH_AtBPE_like 254 339 - -
Bpe10g00365 424 PANTHER - 93 370 - -
Bpe10g00365 424 MobiDBLite consensus disorder prediction 180 255 - -
Bpe10g00365 424 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 93 370 IPR024097 GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01469 Bpe-Chr4:21276729 Bpe10g00365 Bpe-Chr10:11243759 5.44E-26 dispersed
Bpe07g00808 Bpe-Chr7:14414093 Bpe10g00365 Bpe-Chr10:11243759 5.76E-53 dispersed
Bpe10g00365 Bpe-Chr10:11243759 Bpe13g00756 Bpe-Chr13:14089584 7.57E-86 dispersed
Bpe13g00471 Bpe-Chr13:12200788 Bpe10g00365 Bpe-Chr10:11243759 1.41E-46 dispersed
Bpe13g00187 Bpe-Chr13:9819148 Bpe10g00365 Bpe-Chr10:11243759 4.55E-47 transposed
Bpe10g00365 Bpe-Chr10:11243759 Bpe06g00416 Bpe-Chr6:15556085 2.10E-170 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21931 PF00010 HLH 3.00E-06 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00365 - - pper:18768534 397.127