Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe10g00373 | ATGAGTTCTTCTTCGTACTTCCAGTTTCGTGATTTTGGTAATCTTTCCACTAATTCTTTCTTTGGGTATCGAGAAAGCTACGATTCAAGGAAGGAGATGTTTTCCAAGAGCAATAATGATCTCCCTTTCGATATACATGACTCCGACGAGATTGTTTTGGTCGACCTTCTCACGAGAGGAGTCGAAGAAGCCACGAAAACGAACTCGTTCAAAGCTCAGGAAGAAGGAGAAGAAGTGTGGAGGTTGGAGCCCAAGGGTGAATCCATGGAAGAAGAAGGGCCAAGAAAGGAGAAGAGCTACAGAGGGGTCCGACGGCGGCCGTGGGGGAAGTACGCGGCGGAGATCAGGGATTCGACGAGGCATGGAATTCGGGTTTGGTTAGGGACGTTCGAGACCGCGGAAGCGGCTGCTTTGGCATACGATCAAGCGGCGTTTTCCATGAGAGGCTACAGGGCGGTGTTGAATTTTCCGGTGGAAATGGTGGTGCAATCTCTGCAACAACTGGGTCAAATAAAGGGTTGGGAAGGCGATGACAGTTGTTCGCCGGTAATGGCGCTCAAGAGGAAACACCGTATGAGTAGGAAGACGACGACGTCTAGAAGGAAGAGAAGCAAAGAAATTATAGAGAAGAAAATACAGAGAAACTTGCTGGTTTTGGAGGATTTGGGTGCAGATTACTTAGAGGAGCTTCTGAGTTTAAGCTCTTGA | 708 | 48.31 | MSSSSYFQFRDFGNLSTNSFFGYRESYDSRKEMFSKSNNDLPFDIHDSDEIVLVDLLTRGVEEATKTNSFKAQEEGEEVWRLEPKGESMEEEGPRKEKSYRGVRRRPWGKYAAEIRDSTRHGIRVWLGTFETAEAAALAYDQAAFSMRGYRAVLNFPVEMVVQSLQQLGQIKGWEGDDSCSPVMALKRKHRMSRKTTTSRRKRSKEIIEKKIQRNLLVLEDLGADYLEELLSLSS | 235 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 11289704 | 11290411 | - | Bpe002714.1 | Bpe10g00373 | 109495 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe10g00373 | 235 | PRINTS | Ethylene responsive element binding protein signature | 100 | 111 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe10g00373 | 235 | PRINTS | Ethylene responsive element binding protein signature | 123 | 139 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe10g00373 | 235 | ProSiteProfiles | AP2/ERF domain profile. | 99 | 157 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe10g00373 | 235 | PANTHER | DNA-BINDING DOMAIN | 32 | 233 | IPR044808 | GO:0003700|GO:0009873 | |
Bpe10g00373 | 235 | CDD | AP2 | 98 | 158 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe10g00373 | 235 | SMART | rav1_2 | 99 | 163 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe10g00373 | 235 | SUPERFAMILY | DNA-binding domain | 99 | 159 | IPR016177 | GO:0003677 | |
Bpe10g00373 | 235 | MobiDBLite | consensus disorder prediction | 67 | 98 | - | - | |
Bpe10g00373 | 235 | Pfam | AP2 domain | 99 | 149 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe10g00373 | 235 | MobiDBLite | consensus disorder prediction | 68 | 98 | - | - | |
Bpe10g00373 | 235 | Gene3D | AP2/ERF domain | 98 | 159 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe10g00373 | 235 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B | 32 | 233 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe03g00910 | Bpe10g00373 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g00910 | Bpe-Chr3:28830105 | Bpe10g00373 | Bpe-Chr10:11289704 | 1.00E-61 | dispersed | |
Bpe09g00332 | Bpe-Chr9:3195004 | Bpe10g00373 | Bpe-Chr10:11289704 | 2.66E-63 | dispersed | |
Bpe10g00373 | Bpe-Chr10:11289704 | Bpe14g01247 | Bpe-Chr14:9403953 | 5.65E-50 | dispersed | |
Bpe10g00373 | Bpe-Chr10:11289704 | Bpe06g00427 | Bpe-Chr6:15659310 | 9.89E-30 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21933 | PF00847 | AP2 | 5.50E-14 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe10g00373 | K14516 | - | pvy:116118059 | 184.111 |