Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00373 ATGAGTTCTTCTTCGTACTTCCAGTTTCGTGATTTTGGTAATCTTTCCACTAATTCTTTCTTTGGGTATCGAGAAAGCTACGATTCAAGGAAGGAGATGTTTTCCAAGAGCAATAATGATCTCCCTTTCGATATACATGACTCCGACGAGATTGTTTTGGTCGACCTTCTCACGAGAGGAGTCGAAGAAGCCACGAAAACGAACTCGTTCAAAGCTCAGGAAGAAGGAGAAGAAGTGTGGAGGTTGGAGCCCAAGGGTGAATCCATGGAAGAAGAAGGGCCAAGAAAGGAGAAGAGCTACAGAGGGGTCCGACGGCGGCCGTGGGGGAAGTACGCGGCGGAGATCAGGGATTCGACGAGGCATGGAATTCGGGTTTGGTTAGGGACGTTCGAGACCGCGGAAGCGGCTGCTTTGGCATACGATCAAGCGGCGTTTTCCATGAGAGGCTACAGGGCGGTGTTGAATTTTCCGGTGGAAATGGTGGTGCAATCTCTGCAACAACTGGGTCAAATAAAGGGTTGGGAAGGCGATGACAGTTGTTCGCCGGTAATGGCGCTCAAGAGGAAACACCGTATGAGTAGGAAGACGACGACGTCTAGAAGGAAGAGAAGCAAAGAAATTATAGAGAAGAAAATACAGAGAAACTTGCTGGTTTTGGAGGATTTGGGTGCAGATTACTTAGAGGAGCTTCTGAGTTTAAGCTCTTGA 708 48.31 MSSSSYFQFRDFGNLSTNSFFGYRESYDSRKEMFSKSNNDLPFDIHDSDEIVLVDLLTRGVEEATKTNSFKAQEEGEEVWRLEPKGESMEEEGPRKEKSYRGVRRRPWGKYAAEIRDSTRHGIRVWLGTFETAEAAALAYDQAAFSMRGYRAVLNFPVEMVVQSLQQLGQIKGWEGDDSCSPVMALKRKHRMSRKTTTSRRKRSKEIIEKKIQRNLLVLEDLGADYLEELLSLSS 235
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 11289704 11290411 - Bpe002714.1 Bpe10g00373 109495
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00373 235 PRINTS Ethylene responsive element binding protein signature 100 111 IPR001471 GO:0003700|GO:0006355
Bpe10g00373 235 PRINTS Ethylene responsive element binding protein signature 123 139 IPR001471 GO:0003700|GO:0006355
Bpe10g00373 235 ProSiteProfiles AP2/ERF domain profile. 99 157 IPR001471 GO:0003700|GO:0006355
Bpe10g00373 235 PANTHER DNA-BINDING DOMAIN 32 233 IPR044808 GO:0003700|GO:0009873
Bpe10g00373 235 CDD AP2 98 158 IPR001471 GO:0003700|GO:0006355
Bpe10g00373 235 SMART rav1_2 99 163 IPR001471 GO:0003700|GO:0006355
Bpe10g00373 235 SUPERFAMILY DNA-binding domain 99 159 IPR016177 GO:0003677
Bpe10g00373 235 MobiDBLite consensus disorder prediction 67 98 - -
Bpe10g00373 235 Pfam AP2 domain 99 149 IPR001471 GO:0003700|GO:0006355
Bpe10g00373 235 MobiDBLite consensus disorder prediction 68 98 - -
Bpe10g00373 235 Gene3D AP2/ERF domain 98 159 IPR036955 GO:0003700|GO:0006355
Bpe10g00373 235 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 32 233 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bpe03g00910 Bpe10g00373 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00910 Bpe-Chr3:28830105 Bpe10g00373 Bpe-Chr10:11289704 1.00E-61 dispersed
Bpe09g00332 Bpe-Chr9:3195004 Bpe10g00373 Bpe-Chr10:11289704 2.66E-63 dispersed
Bpe10g00373 Bpe-Chr10:11289704 Bpe14g01247 Bpe-Chr14:9403953 5.65E-50 dispersed
Bpe10g00373 Bpe-Chr10:11289704 Bpe06g00427 Bpe-Chr6:15659310 9.89E-30 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21933 PF00847 AP2 5.50E-14 CL0081 Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00373 K14516 - pvy:116118059 184.111