Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00374 ATGACTGGTTCTGGCTCTCCTTGTGGAGCGTGCAAGTTTTTAAGAAGAAAATGCATCAGAGGCTGTGTTTTTGCTCCTTATTTCTGCCATGAACAAGGCGCTTCGCACTTTGCCGCCATTCACAAGGTCTTCGGAGCTAGCAATGTCTCCAAGCTTCTCGCCCATCTTCCCGTCTCCGAACGCTGCGAAGCTGCCGTTACGATCTCTTACGAAGCTCAGGCCCGCCTCCATGACCCAATTTACGGCTGCGTTTCTCATATCTTTGCTCTCCAACAGCAGGTTGTGAATTTGCAGGCGCAATTAACTTCTTTGAAAGAACAAGCTGCTCAAAGCATGTTCAACGGTTGTTCTACAGCAAACCCTGGTGAGAATTTTTGTGGGAGACTTCCTCCTCAACCACAGGATCTTTCGAGTTTGGTGAAGTTGGAAAAATCAAGTGAAATGTCACAATTTCATCAGAATCTCTGCCATGCCAACTCTACAGTGCCATACTACAACGAGAAGAGCATTATGGAATCTTACCCTCCGGAGAATTTGTTCACTCCGGAAAAAAATCTCAGCTTGGGGGAGACCTCTAATCCCACATCTTCTTTTGAAATGCATACCGGGAACAGGCAGGAATGGAGTTTCGGAGATGTCGACGAGCTTCAGTCCATGGCTTTCGGCTATTTTCACCATTGA 681 46.99 MTGSGSPCGACKFLRRKCIRGCVFAPYFCHEQGASHFAAIHKVFGASNVSKLLAHLPVSERCEAAVTISYEAQARLHDPIYGCVSHIFALQQQVVNLQAQLTSLKEQAAQSMFNGCSTANPGENFCGRLPPQPQDLSSLVKLEKSSEMSQFHQNLCHANSTVPYYNEKSIMESYPPENLFTPEKNLSLGETSNPTSSFEMHTGNRQEWSFGDVDELQSMAFGYFHH 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11320668 11321439 + Bpe002715.1 Bpe10g00374 109496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00374 226 Coils Coil 87 107 - -
Bpe10g00374 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 225 - -
Bpe10g00374 226 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Bpe10g00374 226 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Bpe10g00374 226 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 225 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe06g00431 Bpe10g00374 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00325 Bpe-Chr9:2947529 Bpe10g00374 Bpe-Chr10:11320668 2.18E-58 dispersed
Bpe09g00327 Bpe-Chr9:3009051 Bpe10g00374 Bpe-Chr10:11320668 1.71E-71 dispersed
Bpe10g00374 Bpe-Chr10:11320668 Bpe11g01519 Bpe-Chr11:11281461 2.30E-33 dispersed
Bpe10g00374 Bpe-Chr10:11320668 Bpe06g00431 Bpe-Chr6:15701204 3.50E-135 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21934 PF03195 LOB 1.60E-35 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00374 K13945 - vvi:100266975 286.189