Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00376 ATGGTGGTTGCAAATTTGTCAACTATATATCCTATAGATTTGGAAGCTCCCGAAGGTGGAGTTGATGACATGACTAAGCTATCATATTTACATGAGCCAGGAGTGTTGCATAATTTGGCAGTTAGATATGAGTTGAATGAAATTTATACTTATTCAGGAAACATTCTCATTGCCCTCAATCCATTCCAAAGTCTACCATATTTGTATAATTCTTATGTGATGGAGCAGTACAAGGGCGCAACATCTGGAGAACTGTGTCCTCATGTCTTTGCTATTGCTGATGTCGCATATAGGTCAATGATTAATGACGGGAAAAGCATCTCTATTCTAGTCAGTGGAGAAAGTGGGGCTGGAAAGACTGAAACTACCAAAATGCTTATGCGTTACCTTGCCTTTTTAGGTGGGAGAGCAGCAGCTGAAGGACGTACGGTTGAACAACAAGTTCTAGAATCAAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACAGTTAGAAATAGTAATTCAAGTCGTTTTGGAAAATTTGTTGAGATTCAATTTGATAAAAATGGAAGAATATCAGGAGCTGCTATTAGAACTTATCTTCTTGAAAGATCTCGTGTTTGCCAAATATCGGATCCTGAAAGAAATTATCATTGTTTTTATCTTCTCTGCGCAGCTCCACCTCAGGAGAGAGAGAAATACAAGTTAGGAAATCATAAATCATTTCACTACCTAAACCAATCAAGTTGTTATGAATTACCTGGTGTAAATGATGCTCATGATTATCTTGCCACAAAGAGAGCCATGGATATAGTTGGAATAGGTGAAAAAGAACAGGATGCGATTTTTAAAGTTGTGGCTGCAATTCTACATCTCGGTAACATTGATTTTGAAAGGAGAGATGAAAGTGATTCAGCAGTTCTCAAGGATGAGGAATCAAACTTTCACCTTCATGTGGCAGCAGAACTTCTTATGTGTGATGCTTATTCATTGGAAGAGGCATTGTGCAAGCGTCAAATGATAACTCCTGAGGAAATTATCATGAGAAGTCTCGATCCAGTTGGTGCGACAGTTAGCAGGGACGGCTTAGCAAAAACAATATATTCCCGTTTGTTTGATTGGTTGGTGGATAAAATCAACATCTCCATTGGGCAAGACCCTGGCTCAAATTGTCTGATTGGGGTCCTAGACATCTATGGTTTTGAAAGCTTTAATACAAATAGCTTTGAGCAGTTCTGCATTAATTTAACAAACGAAAAGCTGCAACAACATTTCAACCAGCATGTATTCAAGATGGAACAAGAAGAATATACAAAAGAGGGTATTGATTGGAGTTACATTGAATTCATTGATAATCAAGATAAACCAGGCGGAATAATTTCTTTGCTTGATGAGGCTTGTATGTTTCCAAAGTCAAATCATGAAACTTTTTCACAAAAACTTTACCAGACATTTAAGAATCACAAGCGTTTCTTGAAGCCAAAGTTGGCGCGCACAGACTTCACCATTGTTCATTATGCAGGAGATGTTCAATATCAGTCTGACCAATTTTTAGATAAAAACAAAGATTATGTTGTTCCCGAGCATCAAAATTTATTGAGTGCTTCAAAATGTCCTTTTGTGGCATCTCTTTTCCCTCCACTGACTGAGGAGTCAGCCAAATCATCAAAATTTTCTTCAATTGGATCCCGTTTTAAACTACAACTACATCAATTGATGGATACGCTTAAGGCAACCGAACCACATTACATTAGATGTGTAAAGCCAAATAATTTCTTAAAACCTGCCATATTTGAGAATGCTGATGTCATTCAGCAGCTACGATCCGGTGGTGTTCTAGAGGCTGTTAGAATCAAATGCGCAGGATATCCGACATGCAGGACTTTCTTTGAATTTTTAACCCGTTTTGGAATCCTTGCTCCAGAGATATTGGAAGGGGACTTTGAAGAAAAGACTGCATGTGAAATGATTCTGGAGAAGGTGGGAGTAAAAGGTTATCAGATTGGAAAATCTAAAGTCTTCTTAAGAGCTGGTCAGATGGCTGAGCTAGATGCACAGAGAGCAAAATATCTGGGCTTATCAGCTAAGATAATTCAAAAGCAGATTAGATCATGTCTTGCTCGTCAGAAGTTCATTGCAATGCGGAAGGCTTCTATTCGTATACAATCATATTGGAGAGGCAAGTCCCTTAAAATTCGTGTTTTGGCTCGTGAAATATACGAGATATTGAGAAGGGAGAAAGCTGCTGTCAAAATACAGAAAAATATTCGAAGACAACTTGCGAGAGAAGCATACCTAAAAATTACATTCTCTGTAGTTTTGTTTCAGTCAGCCTTACGTGCAATGGCTGCTCGGGATAAATTTAAATTTAGAAGGAAAAACAGAGCAGCAACTGTTATTCAGGTAATAATCTGTGGTCAGTCTATATGGGAACTTTATTCAAAATTTCAAGATTGA 2439 37.93 MVVANLSTIYPIDLEAPEGGVDDMTKLSYLHEPGVLHNLAVRYELNEIYTYSGNILIALNPFQSLPYLYNSYVMEQYKGATSGELCPHVFAIADVAYRSMINDGKSISILVSGESGAGKTETTKMLMRYLAFLGGRAAAEGRTVEQQVLESNPVLEAFGNAKTVRNSNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPQEREKYKLGNHKSFHYLNQSSCYELPGVNDAHDYLATKRAMDIVGIGEKEQDAIFKVVAAILHLGNIDFERRDESDSAVLKDEESNFHLHVAAELLMCDAYSLEEALCKRQMITPEEIIMRSLDPVGATVSRDGLAKTIYSRLFDWLVDKINISIGQDPGSNCLIGVLDIYGFESFNTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEGIDWSYIEFIDNQDKPGGIISLLDEACMFPKSNHETFSQKLYQTFKNHKRFLKPKLARTDFTIVHYAGDVQYQSDQFLDKNKDYVVPEHQNLLSASKCPFVASLFPPLTEESAKSSKFSSIGSRFKLQLHQLMDTLKATEPHYIRCVKPNNFLKPAIFENADVIQQLRSGGVLEAVRIKCAGYPTCRTFFEFLTRFGILAPEILEGDFEEKTACEMILEKVGVKGYQIGKSKVFLRAGQMAELDAQRAKYLGLSAKIIQKQIRSCLARQKFIAMRKASIRIQSYWRGKSLKIRVLAREIYEILRREKAAVKIQKNIRRQLAREAYLKITFSVVLFQSALRAMAARDKFKFRRKNRAATVIQVIICGQSIWELYSKFQD 812
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11332595 11339786 - Bpe002717.1 Bpe10g00376 109498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00376 812 Pfam IQ calmodulin-binding motif 688 705 IPR000048 GO:0005515
Bpe10g00376 812 Pfam IQ calmodulin-binding motif 740 759 IPR000048 GO:0005515
Bpe10g00376 812 Pfam IQ calmodulin-binding motif 709 721 IPR000048 GO:0005515
Bpe10g00376 812 Pfam Myosin head (motor domain) 21 670 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe10g00376 812 PRINTS Myosin heavy chain signature 153 180 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe10g00376 812 PRINTS Myosin heavy chain signature 49 68 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe10g00376 812 PRINTS Myosin heavy chain signature 106 131 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe10g00376 812 PRINTS Myosin heavy chain signature 386 414 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe10g00376 812 Gene3D Kinesin motor domain 22 612 IPR036961 -
Bpe10g00376 812 CDD MYSc_Myo11 33 670 IPR036018 -
Bpe10g00376 812 Gene3D - 396 573 - -
Bpe10g00376 812 ProSiteProfiles IQ motif profile. 765 791 IPR000048 GO:0005515
Bpe10g00376 812 PANTHER MYOSIN-9 2 802 - -
Bpe10g00376 812 Gene3D Myosin VI head, motor domain, U50 subdomain 269 551 - -
Bpe10g00376 812 ProSiteProfiles Myosin motor domain profile. 19 682 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe10g00376 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 724 IPR027417 -
Bpe10g00376 812 Gene3D - 209 267 - -
Bpe10g00376 812 SMART MYSc_2a 13 683 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe10g00376 812 Gene3D - 741 793 - -
Bpe10g00376 812 Gene3D - 686 740 - -
Bpe10g00376 812 Gene3D - 617 683 - -
Bpe10g00376 812 SMART iq_5 684 706 IPR000048 GO:0005515
Bpe10g00376 812 SMART iq_5 707 731 IPR000048 GO:0005515
Bpe10g00376 812 SMART iq_5 738 760 IPR000048 GO:0005515
Bpe10g00376 812 SMART iq_5 761 783 IPR000048 GO:0005515
Bpe10g00376 812 ProSiteProfiles IQ motif profile. 739 763 IPR000048 GO:0005515
Bpe10g00376 812 PANTHER MYOSIN 2 802 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00376 Bpe-Chr10:11332595 Bpe11g01319 Bpe-Chr11:9861868 0 dispersed
Bpe10g00376 Bpe-Chr10:11332595 Bpe09g00645 Bpe-Chr9:15089637 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00376 K10357 - nnu:104610077 1259.59