Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00380 ATGGGTAATTCTGATTTCGTCTACTCTTCTGCCATGAACGTCGAGTGTGCACATAGAGTGGCGGTTCCTCCGCCGCAGCCATTTGTCAAGTCTTTGAAGAACTCACTGAAAGAAACCTTTTTCCCCGACGACCCACTCAGACAGTTCAAAAACCAGCCTGTTTCGAGAAAATTACTTCTAGGTTTTCAGTATTTCTTTCCGATTCTCGAGTGGGCTCCGCGTTACAACTTCGATTTCTTCAAAGCTGATCTCATTTCTGGAATCACCATTGCTAGCCTTGCCATTCCTCAGGGCATAAGCTACGCCAAGCTAGCCAACTTACCGCCTATTCTCGGCCTATATTCGAGTTTTATTCCTCCTTTGGTGTATGCAATGATGGGTAGTTCGAGAGATTTAGCAGTTGGAACAGTGGCTGTTGCTTCTCTCCTCATAGCCTCCATGCTTGGACGTGAGGTTAATGCTATGGAGAATCCCAAGCTTTACCTCCATCTTGCCTTAACATCAACGTTTTTCTCGGGAGTTTTCCAGGCTTCATTGGGTTTATTAAGGCTAGGTTTTATAGTGGATTTTCTGTCACACGCGACGATAGTAGGGTTCATGGCAGGAGCCGCAACAGTTGTTTGCCTGCAACAACTGAAAGGAGTTCTTGGGCTTGTACATTTCACCCATGGCACTGACCTTGTCTCTGTTATGCGTTCTGTCTTCTCCCAAGTTCATCAGTGGCGATGGGAAAGCGGCGTTCTGGGCTGCGGTTTCCTGTTCTTCCTTATCAGCACAAGATACGTAAGCAAGAAAAGGCCAAGATTCTTCTGGGTATCGGCCATGGCTCCTCTGACGTCGGTGATCTTGGGAAGCCTCCTCGTTTACCTCACACATGCAGAGAAACATGGAGTTCAAGTGATAGGGAACCTCAAGAAAGGGCTGAATCCACCGTCCGTCACGGATCTAATTTTCACTGGGCCTTATCTGACGATTGTGATTAAAACTGGAATCATCACTGGCGTTATCGCTCTAGCTGAAGGCATAGCAGTAGGAAGAAGCTTTGCAATGTTCAAAAACTACAACATCGATGGGAACAAAGAGATGGTCGCCATTGGAACTATGAACATCGTTGGTTCCTTCACCTCTTGTTACCTCGCAACAGGCCCGTTTTCAAGGTCGGCGGTGAACTACAACGCCGGATGCAAGACTGCGGTTTCTAACATTGTAATGGCGATCGCGGTGATGTTTACATTGTTGTTTTTAACGCCATTGTTCCATTATACTCCTCTGGTGGTTCTGTCCGCCATTATCATCTCTGCGATGCTGGGTCTCATCGATTACGAGGCAGCTATTCATCTCTGGAAGGTCGATAAGTTTGATTTCCTAGTTTGTATTGGTGCTTATCTTGGAGTAGTCTTTGGAAGCGTAGAAATGGGCTTGGTTATTGCGGTTGTACTGTCTGTGCTTAGAGTATTACTTTTCATTGCGAGGCCAAGAACTTGTGTTCTTGGTAATATTCCCAATTCCATGATTTTCAGAAACGTTGAACAATATCCTAATTTAAGCAATGTTCCTGGAGTTCTTATCCTTGAAATTGATGCTCCAATTTACTTTGCAAATTCAAGCTACTTAAGAGAAAGGATTACAAGGTGGATCGATGAAGAAGAAGACAGGATAAAATCTTCCGGAGATGTTAGTTTGCAGTACGTTGTTTTAGATATGAGTGCTGTTGGTAATATTGACACGAGTGGAATAAGCATGATGGAAGAGGTGAAGAAGCTTATTGATAGAAGAGGGCTCAAGCTTGTTTTGGCCAATCCTGGAGGAGAGGTCATGAAGAAGCTCAACAAATCAAAGTTCTTAGACAACATAGGTCAAGAATGGATCTACCTCACGGTGGGGGAAGCCGTAGCAGCCTGCAATTACATGCTTCACACTTGCAAGCCGAGTTCCGAGAAAGGTGAAGCCGAGGCCTGGAATAGCGTCTAA 1971 45.15 MGNSDFVYSSAMNVECAHRVAVPPPQPFVKSLKNSLKETFFPDDPLRQFKNQPVSRKLLLGFQYFFPILEWAPRYNFDFFKADLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLVYAMMGSSRDLAVGTVAVASLLIASMLGREVNAMENPKLYLHLALTSTFFSGVFQASLGLLRLGFIVDFLSHATIVGFMAGAATVVCLQQLKGVLGLVHFTHGTDLVSVMRSVFSQVHQWRWESGVLGCGFLFFLISTRYVSKKRPRFFWVSAMAPLTSVILGSLLVYLTHAEKHGVQVIGNLKKGLNPPSVTDLIFTGPYLTIVIKTGIITGVIALAEGIAVGRSFAMFKNYNIDGNKEMVAIGTMNIVGSFTSCYLATGPFSRSAVNYNAGCKTAVSNIVMAIAVMFTLLFLTPLFHYTPLVVLSAIIISAMLGLIDYEAAIHLWKVDKFDFLVCIGAYLGVVFGSVEMGLVIAVVLSVLRVLLFIARPRTCVLGNIPNSMIFRNVEQYPNLSNVPGVLILEIDAPIYFANSSYLRERITRWIDEEEDRIKSSGDVSLQYVVLDMSAVGNIDTSGISMMEEVKKLIDRRGLKLVLANPGGEVMKKLNKSKFLDNIGQEWIYLTVGEAVAACNYMLHTCKPSSEKGEAEAWNSV 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11379341 11383873 - Bpe002723.1 Bpe10g00380 109502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00380 656 Pfam Sulfate permease family 80 459 IPR011547 GO:0016021
Bpe10g00380 656 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Bpe10g00380 656 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 653 - -
Bpe10g00380 656 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Bpe10g00380 656 SUPERFAMILY SpoIIaa-like 513 634 IPR036513 -
Bpe10g00380 656 Pfam STAS domain 512 630 IPR002645 -
Bpe10g00380 656 Gene3D STAS domain 491 636 IPR036513 -
Bpe10g00380 656 PANTHER SULFATE TRANSPORTER 2 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bpe10g00380 656 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
Bpe10g00380 656 TIGRFAM sulP: sulfate permease 67 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00092 Bpe-Chr2:692098 Bpe10g00380 Bpe-Chr10:11379341 0 dispersed
Bpe05g00891 Bpe-Chr5:22001712 Bpe10g00380 Bpe-Chr10:11379341 1.56E-09 dispersed
Bpe06g00723 Bpe-Chr6:17711249 Bpe10g00380 Bpe-Chr10:11379341 0 dispersed
Bpe10g00380 Bpe-Chr10:11379341 Bpe11g00223 Bpe-Chr11:1487296 0 dispersed
Bpe10g00380 Bpe-Chr10:11379341 Bpe04g00817 Bpe-Chr4:5392011 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00380 K17471 - qsu:112027234 1129.39