Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00383 ATGATGTTTCCTGCTGCCATCTCCAATTCAACTTCCTTGTCTGAGGAAGCTAGCGTCTCTTCTGGTACTAAAGTTCAGGACTTTGGTTGTTTTAATCCACCTCTTTCAACTATTTCTGATCCTCAACCATCTGATCAAAAGATCAAGAAAAAAAGAAGCCTGCCAGGAAACCCAGACCCAGATGCTGAAGTGATTGCTTTATCTCCAAAAACCTTGTTAGCTACGAATAGATTTGTGTGTGAGATTTGCAGCAAAGGGTTTCAGAGAGATCAAAATCTGCAGCTTCACAGAAGAGGCCACAATCTGCCATGGAAACTGAAGCAGAGAAACAGCAAAGAGATTAAAAAGAAAGCTTATGTTTGCCCAGAGCCTTCTTGCGTTCATCACCATCCCTCTAGAGCTCTAGGCGATTTAACTGGGATTAAGAAACATTTCTGCAGAAAACATGGGGAGAAAAAATGGAAATGCGAGAAATGCTCAAAGATCTACGCAGTTCAATCAGATTGGAAGGCCCACTCCAAAACTTGTGGCACTAGAGAATATAGATGTGATTGTGGAACACTTTTCTCCAGGAAGGATAGCTTCATCACACACAGAGCATTCTGCGATGCTTTAGCGGAAGAAAGTGCAAGAGTTTCAGCAAATCAAATGGCCCTAACCGCCATTTCCACCTCCGCCGCCGCCACTACTGACGAAAAGCTCCAACCGTTCTTACCTTTCTCTTCCCACCACCATTTTCGACACCCAAACCTAAAATCTAACACTAACAGCGATCTCCTCCAAAACCCACTTCACATCAAGACCGAAAGAGATCACCACCTTTTCCAAATCCCACCAACCTCCTCTTTCTCGACAATTTCAACCACCATCACCACCACCACTCCTCCATTCTTGATGCACGATCTTCCCCCACCGTTCGGCCACCCCATGCATGCAACGTCGGCCTCAGCAGCACTGTCAGCCACTGCGCTGCTCCAGAAGGCTGCCACCATTGGCGCTGCGCCAACTTCTGCACAACGGGCGCAGTGTGTGGGTCACATGGCTCACGGCCACCTCGACATTGGTGAGTGCGGAAGGGGGAGTCAGATGAACTCAGTGAGCTATATCTCACCGGAGTATCACCTTGGTGGGCTCACTTCCTCCAGCCTCACATCCACGTGGCATACGAGTGATCGTCTGACAAGGGACTTTCTCGGTCTCACAAGCGTTGGCCATGGAGGTTCTGGGGGCGGAGGTGGAAACGGGGAAGATGCTGACGTTGGCATAGACATAAAAGATATGCTAACGTATACAGGGGGCTTACAATTTGAACAGTTCAACCGCGACCAGCCAATGTTCAAGCCTCATGGGTATGGGTTCGCTGAGCCAACCGCGTCTGAAACATGGGCGGATTGCTAG 1398 48.64 MMFPAAISNSTSLSEEASVSSGTKVQDFGCFNPPLSTISDPQPSDQKIKKKRSLPGNPDPDAEVIALSPKTLLATNRFVCEICSKGFQRDQNLQLHRRGHNLPWKLKQRNSKEIKKKAYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARVSANQMALTAISTSAAATTDEKLQPFLPFSSHHHFRHPNLKSNTNSDLLQNPLHIKTERDHHLFQIPPTSSFSTISTTITTTTPPFLMHDLPPPFGHPMHATSASAALSATALLQKAATIGAAPTSAQRAQCVGHMAHGHLDIGECGRGSQMNSVSYISPEYHLGGLTSSSLTSTWHTSDRLTRDFLGLTSVGHGGSGGGGGNGEDADVGIDIKDMLTYTGGLQFEQFNRDQPMFKPHGYGFAEPTASETWADC 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11416587 11419346 + Bpe002726.1 Bpe10g00383 109505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00383 465 Pfam Zinc finger, C2H2 type 78 100 IPR013087 -
Bpe10g00383 465 SMART c2h2final6 78 100 IPR013087 -
Bpe10g00383 465 SMART c2h2final6 154 174 IPR013087 -
Bpe10g00383 465 Gene3D Classic Zinc Finger 57 126 - -
Bpe10g00383 465 PANTHER PROTEIN INDETERMINATE-DOMAIN 12 9 442 - -
Bpe10g00383 465 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 9 442 - -
Bpe10g00383 465 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Bpe10g00383 465 SUPERFAMILY beta-beta-alpha zinc fingers 77 174 IPR036236 -
Bpe10g00383 465 MobiDBLite consensus disorder prediction 35 62 - -
Bpe10g00383 465 Gene3D Classic Zinc Finger 147 214 - -
Bpe10g00383 465 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 100 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00450 Bpe-Chr6:15883216 Bpe10g00383 Bpe-Chr10:11416587 0 dispersed
Bpe10g00110 Bpe-Chr10:1913481 Bpe10g00383 Bpe-Chr10:11416587 1.44E-112 dispersed
Bpe10g00383 Bpe-Chr10:11416587 Bpe11g01719 Bpe-Chr11:13511914 6.97E-102 dispersed
Bpe10g00383 Bpe-Chr10:11416587 Bpe09g00021 Bpe-Chr9:171971 9.34E-122 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21936 PF00096 zf-C2H2 0.0079 CL0361 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00383 K25870 - zju:107425870 506.908