Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00387 TTGAATCTTCTGCAAATGGACCTCCCGAGCGGTCTGCAATCTGATGACGCCAGCCCCGACTGGATGAGCAAAGCGGACAACGCGTGGCAACTCACGTCGGCCACTCTCGTCGGCCTCCAAAGCGTTCCTGGCCTGGTGATTTTGTACGGCAGCATTGTTAAGAAGAAATGGGCCGTCAACTCCGCTTTCATGGCGCTCTACGCCTTCGCCGCCGTCCTCGTCTGCTGGGTCGGGTGGGGGTACCAGATGTCGTTCGGAAAGAAGTTCATCTACTTCTTGGGTCGCCCCAATATCGCGATGGACCAGAAGTTTCTACTGAGCCAAGCTTTCGCCGGGAAAATTCCGAATGCCACGATGATGTATTTCCAGTTCGTGTTTGCGGCCATCACTTTGATCTTGATCGCCGGAGCGCTGCTGGGGCGGATGAATTTCCACGCCTGGATGCTGTTTGTGCCGCTGTGGCTGACCTTCTCCTACACGATTGGGGCGTACAGCATCTGGTGTCCCGATGGGTGGCTTGCCAAGTGGGGTCTGATTGATTACTCCGGTGGCTATGTTATCCACCTCTCTTCCGGAGTTGCTGGTTTCACTGCTGCCTTCTGGGTTGGGCCCCGGCTGGGGAAGGATAGGGAGAGATTTCCGCCCAACAACATTCTTCTTATGCTGGCCGGGGCCGGCCTGCTTTGGATGGGCTGGACCGGATTCAACGGCGGCGATCCTTACGCCGCTAGCACTGATGCATCTCTAGCGGTTCTTAACACCCACGTGTGCGCTGCCACGAGCTTGCTGACGTGGCTTTTGCTTGATATGCTTTTCTTCGGGAAGCCATCTGTAATCGGTGCCACACAAGGGATGATCACCGGCCTAGTGTGCATCACTCCGGCAGCAGGTGAATTTACGTTACTACCCCTCATACTCGATATCAAACTTTTGAACAATAAATATAATGATCGTCTTCATCCAGGAGTGGTACAAGGATGGGCGGCGATTTTAATGGGAATGATGTCTGGATCAATCCCATGGTTCACAATGATGGTAATCCACAAGAAAATATGGATCCTCCGACAAGTGGACGACACAATGGCAGTCTTCCACACCCACGCCGTCGCCGGAAGTCTGGGCGGAATCCTCACCGGCCTCTTCGCCGAGCCCAAACTCAGCCGTCTCTTCTACTTAGTCGATGAATGGGAGCACTACATAGGTCTCTTCTACGGCTTCCACTCCGGCCAAGTCAAAGCAGGTTTCAAACAGATCGGAATTCAGCTTCTGGGTATAGTCTTCGTCGTCTTTGTTAACGTTCTGACGACGAGCCTGATATGTTTAGCCGTGAAACAAATAGTTCCATTGAGGCTGACTGAAGCTGAACTGGAGATGGGGGACGAAGCCATTCATGGCGAGGAAGCTTACGCGTTGTGGGGAGATGGAGAGAAGTACGAGAGTTTTAAGCACAGTGTATCATATCGTATGCAAGAGTTTCCTGAATTCATACGTAATAATCCTACTTAA 1506 52.52 LNLLQMDLPSGLQSDDASPDWMSKADNAWQLTSATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVLVCWVGWGYQMSFGKKFIYFLGRPNIAMDQKFLLSQAFAGKIPNATMMYFQFVFAAITLILIAGALLGRMNFHAWMLFVPLWLTFSYTIGAYSIWCPDGWLAKWGLIDYSGGYVIHLSSGVAGFTAAFWVGPRLGKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYAASTDASLAVLNTHVCAATSLLTWLLLDMLFFGKPSVIGATQGMITGLVCITPAAGEFTLLPLILDIKLLNNKYNDRLHPGVVQGWAAILMGMMSGSIPWFTMMVIHKKIWILRQVDDTMAVFHTHAVAGSLGGILTGLFAEPKLSRLFYLVDEWEHYIGLFYGFHSGQVKAGFKQIGIQLLGIVFVVFVNVLTTSLICLAVKQIVPLRLTEAELEMGDEAIHGEEAYALWGDGEKYESFKHSVSYRMQEFPEFIRNNPT 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11449973 11451607 + Bpe002730.1 Bpe10g00387 109509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00387 501 SUPERFAMILY Ammonium transporter 21 301 - -
Bpe10g00387 501 ProSitePatterns Ammonium transporters signature. 180 205 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bpe10g00387 501 PRINTS Rhesus blood group protein signature 219 237 IPR002229 GO:0005887
Bpe10g00387 501 PRINTS Rhesus blood group protein signature 250 272 IPR002229 GO:0005887
Bpe10g00387 501 PRINTS Rhesus blood group protein signature 123 139 IPR002229 GO:0005887
Bpe10g00387 501 PANTHER AMMONIUM TRANSPORTER MEP2 6 297 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bpe10g00387 501 Gene3D Ammonium transporter AmtB like domains 320 472 IPR029020 -
Bpe10g00387 501 PANTHER AMMONIUM TRANSPORTER 4 MEMBER 1-RELATED 322 494 - -
Bpe10g00387 501 PANTHER AMMONIUM TRANSPORTER 4 MEMBER 1-RELATED 6 297 - -
Bpe10g00387 501 Gene3D Ammonium transporter AmtB like domains 9 306 IPR029020 -
Bpe10g00387 501 Pfam Ammonium Transporter Family 322 469 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bpe10g00387 501 Pfam Ammonium Transporter Family 28 299 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bpe10g00387 501 SUPERFAMILY Ammonium transporter 321 451 - -
Bpe10g00387 501 PANTHER AMMONIUM TRANSPORTER MEP2 322 494 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00171 Bpe-Chr10:4225444 Bpe10g00387 Bpe-Chr10:11449973 0 dispersed
Bpe10g00387 Bpe-Chr10:11449973 Bpe14g01097 Bpe-Chr14:8182698 0 dispersed
Bpe10g00387 Bpe-Chr10:11449973 Bpe13g00701 Bpe-Chr13:13612559 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00387 K03320 - pvy:116145859 776.548