Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00480 ATGGATTCTGCGAGGAGTTGGTTTCAAAAGCTCCAACCACGAGATAAGTTAAGGACCTTATCAAAGAAAAGGGATCCCGATGGTGGAGATGACGAAGAGTCAAAGGTGTCAGCTGATGAGGAAGCTCTATCTAATACTACAAAACAGAAGGCTGCAGCAGCAAAGCAGTATATTGAGAATCACTACAAGGAGCAAATGAAGAACCTGCAGGAGAGAAAAGAACGACGAAATATCTTGGAAAAGAAGTTGGCAGATGCTGATGTTTCTGAGGAAGATCAGAACAATCTACTCAAATTTTTGGAGAAGAAGGAAACAGAATATATGAGGCTTCAAAGGCACAAAATGGGTGCAGATGATTTTGAGTTGTTGACAATGATTGGAAAAGGCGCTTTTGGAGAGGTTCGAGTTTGTAAGGAGAAAACAACGGGTCAAGTATATGCTATGAAAAAGCTAAAGAAATCAGAGATGCTTCGAAGGGGCCAGGTCGAGCATGTGAAAGCTGAGAGAAATTTGCTCGCTGAGGTGGAGAGTAACTGCATTGTCAAACTGTACTGTTCTTTTCAAGATGATGACTATCTTTATCTTATCATGGAATATCTACCTGGTGGAGATATGATGACTTTACTTATGAGAAAAGACACTTTGACTGAGGATGAAGCCAGATTTTACGTTGCACAAACAGTTTTAGCTATTGAATCTATCCATAAACGCAATTACATTCATAGAGATATCAAGCCTGACAACTTGCTGCTTGATCAATATGGACACTTGAGACTATCAGATTTTGGACTGTGTAAACCCTTGGACTGCAGCACGCTCCAAGAACAAGATTTTTCAGTTGGTAACAATTCTAAAGGGTCTGGACCAAATGATGAAGGCTCTGTGGATCCTAAGCGCACACAACAAGAGCAACTACAACATTGGCAAAAGAATCGAAGAATGCTTGCTTATTCTACTGTGGGCACACCAGATTATATAGCTCCTGAGGTTCTGTTGAAGAAGGGCTATGGATTGGAATGTGATTGGTGGTCACTTGGTGCTATAATGTACGAGATGCTTGTTGGCTATCCACCTTTTTATTCGGATGATCCAATGTCAACATGTAGGAAGATAGTTAACTGGAGGACTCATTTGAAGTTCCCTGAAGAAGCAAAGTTATCTCCAGAAGGAAAAGATCTTATTAGTAAGCTCTTGTGTAATGTTGTCCAGAGACTAGGGTCAAAAGGTGCATTTGAAATTAAGGCCCATACATGGTTTGAAGGTACCGAATGGGATAAGCTCTATCAAATGGAAGCTGCATTTATTCCTACGGTAAATGATGAGCTGGATACCCAAAATTTTGAAAAGTTTGAAGAGCTTGACAACCAGAATCAGCCGTCATCCAAAACTGGTCCTTGGAGAAAGATGCTCTCATCTAAGGATATCAACTTTGTTGGCTACACATACAAGAACTTTGAGATTGTAAATGATTATCAATTGCCTGGGATGGCTGAGCTGAAGAAAAAAAGCACCAAACCGAGAAGACCATCCATCAAGTCACTTTTCGATGGTGAGTCGGAAACACCTGAGACGGCAGATAAATTGGAGGAACCATCAAATAATCATTGTGCTCACGGGAGTTTTTTGAACCTATTGCCTCCTGAACTAGAAGTATCTGAAAAGCAAAACAAGCGTTCCTAA 1680 40.65 MDSARSWFQKLQPRDKLRTLSKKRDPDGGDDEESKVSADEEALSNTTKQKAAAAKQYIENHYKEQMKNLQERKERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCKEKTTGQVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVESNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAQTVLAIESIHKRNYIHRDIKPDNLLLDQYGHLRLSDFGLCKPLDCSTLQEQDFSVGNNSKGSGPNDEGSVDPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGLECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSPEGKDLISKLLCNVVQRLGSKGAFEIKAHTWFEGTEWDKLYQMEAAFIPTVNDELDTQNFEKFEELDNQNQPSSKTGPWRKMLSSKDINFVGYTYKNFEIVNDYQLPGMAELKKKSTKPRRPSIKSLFDGESETPETADKLEEPSNNHCAHGSFLNLLPPELEVSEKQNKRS 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12055396 12063218 + Bpe002812.1 Bpe10g00480 109602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00480 559 CDD STKc_NDR_like 118 483 - -
Bpe10g00480 559 MobiDBLite consensus disorder prediction 501 559 - -
Bpe10g00480 559 MobiDBLite consensus disorder prediction 9 31 - -
Bpe10g00480 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Bpe10g00480 559 Coils Coil 62 82 - -
Bpe10g00480 559 ProSiteProfiles AGC-kinase C-terminal domain profile. 420 492 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe10g00480 559 SMART pkinase_C_6 420 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe10g00480 559 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 24 524 - -
Bpe10g00480 559 Pfam Protein kinase domain 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00480 559 Gene3D Phosphorylase Kinase; domain 1 118 203 - -
Bpe10g00480 559 Gene3D Phosphorylase Kinase; domain 1 438 448 - -
Bpe10g00480 559 SMART serkin_6 120 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00480 559 Gene3D Transferase(Phosphotransferase) domain 1 318 437 - -
Bpe10g00480 559 Gene3D Transferase(Phosphotransferase) domain 1 204 270 - -
Bpe10g00480 559 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 524 - -
Bpe10g00480 559 Pfam Protein kinase C terminal domain 438 482 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bpe10g00480 559 MobiDBLite consensus disorder prediction 1 48 - -
Bpe10g00480 559 ProSiteProfiles Protein kinase domain profile. 120 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00480 559 SUPERFAMILY Protein kinase-like (PK-like) 93 470 IPR011009 -
Bpe10g00480 559 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Bpe10g00480 559 MobiDBLite consensus disorder prediction 279 302 - -
Bpe10g00480 559 MobiDBLite consensus disorder prediction 501 533 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00480 Bpe-Chr10:12055396 Bpe12g00392 Bpe-Chr12:9344961 1.68E-68 dispersed
Bpe01g00474 Bpe-Chr1:2926563 Bpe10g00480 Bpe-Chr10:12055396 0 transposed
Bpe05g00048 Bpe-Chr5:873065 Bpe10g00480 Bpe-Chr10:12055396 1.74E-96 transposed
Bpe05g00857 Bpe-Chr5:21780310 Bpe10g00480 Bpe-Chr10:12055396 0 transposed
Bpe08g00532 Bpe-Chr8:3615119 Bpe10g00480 Bpe-Chr10:12055396 0 transposed
Bpe12g00646 Bpe-Chr12:12105926 Bpe10g00480 Bpe-Chr10:12055396 1.93E-65 transposed
Bpe10g00480 Bpe-Chr10:12055396 Bpe06g00550 Bpe-Chr6:16532541 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63530 PF00069 Pkinase 5.80E-64 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00480 K08790 - jre:108982626 969.533