Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00498 ATGGAACCGATCATTTATCTACTCTTCCCTCATTTTGCAGTTCTTACCAAGGATTTTTTATCCCATTTCGCCGATGCAAACGGTGAAGCTAAATACATGAATATCCTGCAAGAGGTTGCCAACCGGAAGGTCCGTGCAGTGTATATTGATCTCGAAGATCTTTTCAATTATAAAGATTTAGACGAGGAATTTCTCAAACGAATTACCGAGAACACACGAAGGTATATTGGAATTTTTGCAGATGTCATTGATGAGCTAATGCCTGAGCCAACAGAGGCTTTTGCAGACGATGATCACGACATATTAATGACCCAAAGGTCTGACGATGGCCCTGATAATGTGGACGGATTAGATCCATTTCAAAAAATGCCTCCAGAAATCAAGCGCTACTTTGAAGTTTACATTAGAGCATCTTCAAAGGGTCGCCCTTTCACTATTAGGGAGGTTAGGGCTTCACATATTGGCCATCTTGTAAGGATATCTGGAATAGTGACACGATGCTCTGATGTTAAGCCACTAATGAGAGTAGCTGTGTACACATGCGAGAATTGTGGTTTTGAGATTTACCAGGAAGTAACAGCCCGAGTTTTCATGCCCCTCTTTGTGTGTCCATCAAAGCGATGTATAACAAATAGATCGAAAGGAAATCTTATCCTCCAACTAAGAGCATCAAAATTTTTGAAGTTTCAGGAGGCCAAAATTCAGGAGTTATCTGAACATGTTCCTAAAGGTCATATTCCTCGAACAATGACTGTTCATTTTAGGGGTGAGCTCACGAGGAAGGTTGCTCCAGGTGATGTTGTTGAGTTATCTGGTATTTTTCTCCCTATACCTTACACTGGCTTTAGGGCAATGCGTGCCGGTCTGGTTGCTGATACTTACTTGGAAGCAATGTCTATCAACCATTTCAAGAAAAAATACGAGGAATATGAACTCAAAGGAGACGAGGCTGATCTAATTGCAAACTTGGCAGAGAGTGGTGATATATATAACAAGTTGGCACGTTCTTTGGCCCCTGAAATTTTTGGGCACGAAGACATAAAAAAAGCATTGCTTCTTCTTCTCGTTGGTGCCCCTCACAGAAAGTTGAAAGATGGAATGAAGATTAGAGGAGATTTACACATATGTTTGATGGGTGATCCTGGTGTGGCAAAGAGTCAACTTCTTAAACACATCATTAATGTTGCACCCAGGGGAGTTTACACTACTGGCAAAGGAAGTAGTGGCGTTGGTCTAACTGCTGCTGTTCAGAAAGATCCGGTGACAAATGAGATGGTCCTTGAAGGAGGGGCTTTGGTCCTAGCCGATATGGGCATTTGTGCTATTGATGAGTTTGACAAGATGGATGAATCTGATCGTACAGCGATACATGAAGTTATGGAGCAGCAGACTGTCAGTATCGCCAAGGCTGGAATCACTACATCTCTGAATGCAAGGACTGCTGTACTTGCTGCTGCCAATCCAGCATGGGGAAGATATGACCTACGGAGAACCCCAGCGGAAAATATAAATCTTCCCCCAGCCCTTTTATCACGATTTGATCTTCTATGGCTGATACTTGATCGAGCTGATTTGGATAGTGATCTTGAAATGGCCAGGCATGTTGTCTATGTTCACCAGAACAAAGAGTCTCCTGCTCTTGGGTTTACTCCTCTAGAACCATCTGTTCTTCGAGCATACATTTCAGCAGCAAGAAGGATATCTCCTTTCTTTCCAAGGGATTTGGAGGAGTATATTGCAAGTGCGTACTCCAGCATTCGACAGGAAGAAGCTAAATCTGACTCTCCACATTCCTATACAACTGTGAGAACTCTGCTCAGTATCCTCCGAATTTCAGCTGCACTAGCAAGACTTCGATTCTCTGAAACAGTTGCTCAGAGTGATGTGGATGAGGCACTGCGGTTAATGCAAATGTCAAAATTTTCTTTATACTCAGATGATCGCCAAAAATCAGGTCTTGATGCCATCTCAGATATCTATTCAATTCTGCGAGATGAAGCTGTAAGGACTAATAAAGTGGATTTGAGCTATGCGCATGTACTCAACTGGATTTCAAGGAAGGGATACAGCGAAGCTCAGCTGAAGGAATGTTTAGAAGAGTATGCAGCCTTAAATGTGTGGCAGATACATCCTCATAGCTTTGATATTCGATTCATTGACTCC 2163 42.49 MEPIIYLLFPHFAVLTKDFLSHFADANGEAKYMNILQEVANRKVRAVYIDLEDLFNYKDLDEEFLKRITENTRRYIGIFADVIDELMPEPTEAFADDDHDILMTQRSDDGPDNVDGLDPFQKMPPEIKRYFEVYIRASSKGRPFTIREVRASHIGHLVRISGIVTRCSDVKPLMRVAVYTCENCGFEIYQEVTARVFMPLFVCPSKRCITNRSKGNLILQLRASKFLKFQEAKIQELSEHVPKGHIPRTMTVHFRGELTRKVAPGDVVELSGIFLPIPYTGFRAMRAGLVADTYLEAMSINHFKKKYEEYELKGDEADLIANLAESGDIYNKLARSLAPEIFGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGKGSSGVGLTAAVQKDPVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADLDSDLEMARHVVYVHQNKESPALGFTPLEPSVLRAYISAARRISPFFPRDLEEYIASAYSSIRQEEAKSDSPHSYTTVRTLLSILRISAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAISDIYSILRDEAVRTNKVDLSYAHVLNWISRKGYSEAQLKECLEEYAALNVWQIHPHSFDIRFIDS 721
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12199940 12205851 - Bpe024682 Bpe10g00498 109620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00498 721 Gene3D - 173 227 - -
Bpe10g00498 721 PRINTS Mini-chromosome maintenance (MCM) protein family signature 458 471 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe10g00498 721 PRINTS Mini-chromosome maintenance (MCM) protein family signature 370 385 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe10g00498 721 PRINTS Mini-chromosome maintenance (MCM) protein family signature 482 494 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe10g00498 721 PRINTS Mini-chromosome maintenance (MCM) protein family signature 509 517 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe10g00498 721 PRINTS Mini-chromosome maintenance (MCM) protein family signature 430 444 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe10g00498 721 Pfam MCM N-terminal domain 17 134 IPR027925 -
Bpe10g00498 721 Gene3D - 310 660 IPR027417 -
Bpe10g00498 721 Gene3D - 13 104 - -
Bpe10g00498 721 PANTHER DNA REPLICATION LICENSING FACTOR MCM7 39 699 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bpe10g00498 721 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 123 135 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bpe10g00498 721 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 161 172 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bpe10g00498 721 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 179 190 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bpe10g00498 721 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 288 298 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bpe10g00498 721 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 196 208 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bpe10g00498 721 Pfam MCM P-loop domain 318 539 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe10g00498 721 Pfam MCM OB domain 146 276 IPR033762 -
Bpe10g00498 721 ProSitePatterns MCM family signature. 438 446 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bpe10g00498 721 SMART mcm 142 641 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bpe10g00498 721 Pfam MCM AAA-lid domain 556 639 IPR041562 -
Bpe10g00498 721 Gene3D - 146 274 IPR012340 -
Bpe10g00498 721 ProSiteProfiles MCM family domain profile. 329 535 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe10g00498 721 CDD MCM7 332 639 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bpe10g00498 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 339 650 IPR027417 -
Bpe10g00498 721 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 39 699 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bpe10g00498 721 SUPERFAMILY Nucleic acid-binding proteins 16 297 IPR012340 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00814 Bpe-Chr1:10377170 Bpe10g00498 Bpe-Chr10:12199940 2.97E-109 dispersed
Bpe08g00796 Bpe-Chr8:9861506 Bpe10g00498 Bpe-Chr10:12199940 2.54E-110 dispersed
Bpe10g00498 Bpe-Chr10:12199940 Bpe02g02150 Bpe-Chr2:22802576 4.56E-93 dispersed
Bpe10g00498 Bpe-Chr10:12199940 Bpe15g00852 Bpe-Chr15:18514200 3.97E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00498 K02210 - jre:109009939 1300.42