Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00506 ATGGAGGAAATCAGCATGGGGTCTTCGTTATTATCTCATATCAATTCGATTAGCTATCCACTTTCAGGGGCGCCGTTTGATTTCTCTGATGGCGCAGGGAAGAGCTCCCTAGGGTTTATGGAGCTTCTGGCTGCTCAAGATCCCTTTCCTTCCTCTTTGTTTGATTTGCCACAGCCACCGTTTCCGTTTCTGCAGCCGTCGTCTGCTCCTTATCCGACCTCCGTTGTCAAAGAGTGTCGAGCGGAGACTGCCGTGAATAACCCACTCACTCCAAACTCCTCCACCTCCTCCGCTTCGTGCGACTCTGTCAATGACGAACCGGCCGAGCACAGTAGAGATGTTAATCAAATCAAGAAAGAGAAGCATAAAACGACATCGAAGTTGAAAGCAAACAAGACAAACGAGAAGAGACAGAGAAAGCCGAGATTTGCGTTTATGACCAAGAGTGAGGTTGATCATCTGGAAGATGGGTATAGATGGAGAAAATACGGTCAAAAAGCCGTCAAGAACAGCTCCTTTCCCAGGAGTTATTATCGTTGCACCACAGCAACATGCGATGTGAAGAAACATGTAGAGAGATGTTTCAGCGATCCAACCATAGTGGTGACGACCTATGAAGGTCAACACACCCATCCAAGCCCAGTCGTGACTCAAACTCCAGCATATCGTTATCAAGATCATCATCAACCCTCTTTCCGATGTTCTTCTTTTCCTGTGAATTTTGATGCTCGCGAGAATGACGCTACGAATTCTGAGTTTGTTCTTCAGAGACTCTTAAAAGCAGCTTCTTTTACAGACAGTGGGCTTCTTCAAGATATCCTCCCCACTAATTGTAAGCTAAAGCAGGAGAAGTAA 855 46.2 MEEISMGSSLLSHINSISYPLSGAPFDFSDGAGKSSLGFMELLAAQDPFPSSLFDLPQPPFPFLQPSSAPYPTSVVKECRAETAVNNPLTPNSSTSSASCDSVNDEPAEHSRDVNQIKKEKHKTTSKLKANKTNEKRQRKPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSSFPRSYYRCTTATCDVKKHVERCFSDPTIVVTTYEGQHTHPSPVVTQTPAYRYQDHHQPSFRCSSFPVNFDARENDATNSEFVLQRLLKAASFTDSGLLQDILPTNCKLKQEK 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12250802 12252117 + Bpe002829.1 Bpe10g00506 109628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00506 284 SUPERFAMILY WRKY DNA-binding domain 146 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe10g00506 284 Pfam WRKY DNA -binding domain 155 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe10g00506 284 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 218 IPR044810 GO:0003700
Bpe10g00506 284 PANTHER WRKY TRANSCRIPTION FACTOR 16 218 - -
Bpe10g00506 284 SMART WRKY_cls 154 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe10g00506 284 MobiDBLite consensus disorder prediction 86 142 - -
Bpe10g00506 284 MobiDBLite consensus disorder prediction 86 104 - -
Bpe10g00506 284 ProSiteProfiles WRKY domain profile. 149 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe10g00506 284 Gene3D WRKY domain 139 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe10g00506 284 MobiDBLite consensus disorder prediction 105 142 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00493 Bpe10g00506 CCT
Bpe03g00493 Bpe10g00506 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00506 Bpe-Chr10:12250802 Bpe14g01092 Bpe-Chr14:8150578 1.61E-58 dispersed
Bpe11g01486 Bpe-Chr11:11058563 Bpe10g00506 Bpe-Chr10:12250802 7.44E-34 transposed
Bpe13g00817 Bpe-Chr13:14475450 Bpe10g00506 Bpe-Chr10:12250802 1.98E-34 transposed
Bpe10g00506 Bpe-Chr10:12250802 Bpe03g00493 Bpe-Chr3:24696111 2.06E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21944 PF03106 WRKY 2.30E-25 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00506 - - jre:109007199 227.254