Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00516 ATGGATGATAGTTGTGCGGTGTGTGCTGACGTTCTGGAGTGGGTAGCCTATGGACCTTGTGGGCACAGGGATGTTTGCTCTACGTGTGTCACTCGTCTTCGCTTCATCTGTGAAGATCGACGCTGCTGTATTTGTAAGTCGGAGTCGGATGTTGTTTTTGTCACCAAGGCTTTAGGAGATTATACAAGTACAATTGGTGACTTTTCAGTCCTACCGTCCCAAAGGAGGGAAGGTCATGTGGGATCATATTGGTTCCATGAAGACACACAGGCATTTTTTGATGATGTGGACCATTACAAGATGATTAAGGCAATGTGTAGGCTGTCGTGCAGTGTTTGTGATAAGATGGAGGAGCAACCACTTGATGGCTCAAAGCGTCAAGTGAGGTTCAGGAATGTTGAACAGCTAAAGGGTCATTTGTTCCACCGACATAAGCTACTTATGTGCAGTCTATGTTTGGAAGGAAGAAAGGTTTTTATTTGTGAACAAAAGCTATATACTAGATCTCAACTGAATCAACATATTAGCACTGGTGACTCTGAGGTGGATGGGAGCGAGAGGGAGAGAGGTGGATTTGCAGGACATCCTACGTGTGAATTTTGCCGAACTCCATTTTATGGGGATAATGAACTGTACTTGCACATGTCAACAGAACACTACACTTGTCATATATGCCAAAGACTCCATCCTGGTCAATATGAGTATTACAGAAATTATGATGACCTAGAGATTCATTTCCGCCATGACCATTTCCTGTGTGAAGATGAGTCCTGCTTGGCTAAGAAGTTTATTGTCTTCCAGTCTGAAGTTGAAATGAAGAGGCATAACACTATTGAACATGGAGGCCGATTATCTCGTTCTAAGCGTAATGCTGCTCTCCAGATTCCTACTAGTTTCCGTTATAGACGAGGCAATGATCAAGATCATCGTCGAGGAGGTAGGACGTTTCGTCGTGATCCTTCTGACAACCAACTTTCCATGGCCATTCAAGCAAGTTTGGAGACAGCTAATTCAGAAGGATCAATGCGTGATCCCTCAGCACCATCATTAGGTGGACAAATAGACTCTGAGAGCCATATTGATCCTTTAATCCAACCACTTGAATTGTTGGACGTTGATCCTGAATCAGCTTCTCGCTATCTTCAAGCATTAGGACATGCTAGGAACGCAACTTTGGAAGAAGCATCTTTTCCACCTCTTTCTGTGGCGCCTAGCAGCAGTCATGCAAATACCAAACAAGATTCTGGTAAGTTGCCTAGCAATACTATGGCAGCACGTCTACGTCAGCAAAGGAAAGTAAATGTTGTAAATTCAGCGCAAGGATGGCCAGCAGCAAGACGTGGACCTTCTTTTCCATCTAAAAAGTTAGCTGAAGCTTGGCCAGCAATTGATGGTACACAGACAGCACCACACAGTTCAGGGGTGTCTAAAGTTGGTATTAGTAGTGGACCTTCACCATCGAGTTCTGCTGTAGATCAGGTACAAGCTGGACCAAGGATGGTCCGTAGACTACCTGCTAGTGGTTTTTCAGGGGAATCAAGCAGCGGTAGCAGAATAACTCATTCTGCTTCAGCTCCTTGTCTCTCTGAAAAAGAATTTGTTGATCGTTCAAGCATCGATTTCCCTCCTGTTACTTCTGCACAAACACGAAAGGCGCCTCCTATGAGCCAGAATTTACTGAATGTGGAAGATGTTCAGACAGCCAATAAGTCCTTGGTTGAAAAAATACGCACTGCTCTAGAAAATGACCCAGACAGATATAATATTTTTAAAGATATATCTGGACAGTATCGCCAGGGTTTAATGGATACAGAAATATATCTGGATTTTGTGCAGCAGTTTGGCTTGTCACATCTTGTAATCGAGTTAGCTAGACTTTGCCCTGATGTGCTGAAGCAGAGAGAACTTCTTGAGATGTACAGTTTAAGGTCACAAAGTGTTGGATCAAGAGAAAATGGTCATTATCTGGAAGGTTGTCTCTCGAAAGAAAAGAAAGGTGCCAAGAAAGGTAAAGGAAAGGGCATAGATGCTGTAGATAAAGGAAAGGGCATAGATCCAAAGGACACCTTGGCGGATAGTGTGATGAGCTCTTTGAGGAAACTGCAGACTGATTTCAAGCCTTCTGACATTGAGGTAGAGGTATTATCAAAGGATGGTTATCGGGCTTCAACAAAAGGGAAATCAAAGGTCATATCTGATGAGCCAAAACTAGTGCCGAGAAATCAAGATGAATTTCCACCTGCTTTCAGGGAAGTAAAACCAAATACTGGGGATGTGGTTGGTGGCAGCAAACAGCGGAAAAAAACATCGAAGTTCCACAGAGTTCGACTAGGTGATGGCTCTTTCTCTGCCCTCCTGGATTCCAAAAATTCGGATCCCGTGTCAGACCCAGATGAAGAAAGTGGGAATTCAGATAGCAAAAAGAAAGTTGAAGGGGCATTGCCTGTGCGTGGGGTTTGGCGAAACGGCGGTGGTAATAAGCTATTTCCTTAG 2493 43.84 MDDSCAVCADVLEWVAYGPCGHRDVCSTCVTRLRFICEDRRCCICKSESDVVFVTKALGDYTSTIGDFSVLPSQRREGHVGSYWFHEDTQAFFDDVDHYKMIKAMCRLSCSVCDKMEEQPLDGSKRQVRFRNVEQLKGHLFHRHKLLMCSLCLEGRKVFICEQKLYTRSQLNQHISTGDSEVDGSERERGGFAGHPTCEFCRTPFYGDNELYLHMSTEHYTCHICQRLHPGQYEYYRNYDDLEIHFRHDHFLCEDESCLAKKFIVFQSEVEMKRHNTIEHGGRLSRSKRNAALQIPTSFRYRRGNDQDHRRGGRTFRRDPSDNQLSMAIQASLETANSEGSMRDPSAPSLGGQIDSESHIDPLIQPLELLDVDPESASRYLQALGHARNATLEEASFPPLSVAPSSSHANTKQDSGKLPSNTMAARLRQQRKVNVVNSAQGWPAARRGPSFPSKKLAEAWPAIDGTQTAPHSSGVSKVGISSGPSPSSSAVDQVQAGPRMVRRLPASGFSGESSSGSRITHSASAPCLSEKEFVDRSSIDFPPVTSAQTRKAPPMSQNLLNVEDVQTANKSLVEKIRTALENDPDRYNIFKDISGQYRQGLMDTEIYLDFVQQFGLSHLVIELARLCPDVLKQRELLEMYSLRSQSVGSRENGHYLEGCLSKEKKGAKKGKGKGIDAVDKGKGIDPKDTLADSVMSSLRKLQTDFKPSDIEVEVLSKDGYRASTKGKSKVISDEPKLVPRNQDEFPPAFREVKPNTGDVVGGSKQRKKTSKFHRVRLGDGSFSALLDSKNSDPVSDPDEESGNSDSKKKVEGALPVRGVWRNGGGNKLFP 830
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12310578 12313792 + Bpe002836.1 Bpe10g00516 109638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00516 830 MobiDBLite consensus disorder prediction 723 830 - -
Bpe10g00516 830 MobiDBLite consensus disorder prediction 398 419 - -
Bpe10g00516 830 MobiDBLite consensus disorder prediction 466 494 - -
Bpe10g00516 830 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Bpe10g00516 830 CDD RING-HC_ZNF598 5 46 IPR041888 -
Bpe10g00516 830 MobiDBLite consensus disorder prediction 302 318 - -
Bpe10g00516 830 MobiDBLite consensus disorder prediction 302 323 - -
Bpe10g00516 830 MobiDBLite consensus disorder prediction 723 740 - -
Bpe10g00516 830 PANTHER ZINC FINGER PROTEIN 598 1 828 IPR044288 GO:0061630|GO:0072344
Bpe10g00516 830 MobiDBLite consensus disorder prediction 464 524 - -
Bpe10g00516 830 SMART c2h2final6 196 219 IPR013087 -
Bpe10g00516 830 SMART c2h2final6 108 144 IPR013087 -
Bpe10g00516 830 SMART c2h2final6 220 250 IPR013087 -
Bpe10g00516 830 SMART c2h2final6 251 280 IPR013087 -
Bpe10g00516 830 MobiDBLite consensus disorder prediction 508 524 - -
Bpe10g00516 830 MobiDBLite consensus disorder prediction 792 814 - -
Bpe10g00516 830 PANTHER EBR1 1 828 - -
Bpe10g00516 830 MobiDBLite consensus disorder prediction 400 419 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00516 K22381 - csv:101214376 1018.07