Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00541 AGAGGAAGAAGAAGAAGAGAAAGAGAAGAGGAGAGAATGGCATATGGGAAAACCCACGGGCTTGATAGATCTTCGCAGGAGATAACTTGTTCGGTTTGGTTGACTGAAATTTTCCGACAAGCGGCGAAACATGTGTTGAGTTTCTTTCTAATGGTAGGTCTCTGCAATGGGATGCACTACCTTTTAAGGCCTCTGTCCCAGCCTCGCATTACATCTGATACCTTTGTTGGATTGATCATTGGCAACTTAGGGTTTATCCAGAAACATCTTAATATATCAACAACTACGTCATTGCGCTATATAATTGATTTTGGTATGTTATGCTACATGTTTGTGTTAGGCTTAGAAATGGATCCAAGTATACTCTTCACAGCACCGACCCGTGATGCTAAGGTAGCCTATGCTGGAATGCTATCTACATTCGTTCTTGCCTTCTCAATTACTCCATTTCTCCATTATTCAAAGGTGAAAGAAATGAGCTTCATCCTCTCCCTCTCCACAAGTCTCTGCGGCACTGCATCGCCAGTGCTTACTCGATTGATAACCAATCTTAAAATAGGCAAATCAGATATCGGACGACTTGTTATTTCTGCTGGAATGTATTCGGATTTTATGTCTACTCTTTTAATCTGCATTGGCTATCTCTTTTGTAGATGCCAAGAGGTACCTATCAGTATTAAAAATGGGTTAGAGATAAGTGGAATGATTTTGGTCCAGACAGTAATTGCTGCCAAGATTTCGCCAATTTTTATGAACTGGGTCAACAATGAAAATCCAGAAGGAAAGCCAATGAAAGGATCACACCTGGTGCTCTCAGTTGCTTTCATGGCTTTTATTTGCTGTTGCCCAGTTTTGTTTGGTTATAATCCTATTTTAAGCTCATTTATTGGTGGAACATTTTTACCTCGAGAAGGTAGAGTATCAAGATGGGTGGTTGGGAAAATCAATTATCTGTTGAACACCATTTTTTATCCTATTTTTTTCTTTTGGATGGGAGTTGAGTGCCAGTTAAGTGATTTTCAACCTGGCCACATATGGACGTGGATCCGGTTGTTTCTTCTATTTGCAATTGTAACAGCTGGGAAGGTTGCTGGAACTGTTATCTCTGGTGTTTTTTTGGGATTTCACTGGCCTGAATCTGTCGCACTAGGATTGCTTTTGACTGTAAAGGGTCATTTTCACATATACATGGCCATTGCTGCAAAAACTGCTGGTAAGACTACCACTTCAACCACCACAGCAATGATTATTGTGATCTTTTTCACTGTCGTGCATGCTCCAACAGTTGTGGCTCATATAATTGAACGGGCAAGAAAACGTGCACCGACCCACAGAATGGCACTTCAATTGCTTGATCCATTAAACGAGCTTAGGATCTTACTGTGTCTTCATGGCCCTCAAAATGTCCCATCTACCGTTAATTTCATGGAGATTTCTAAAGGAACAGCCGACCCAGGAATTGTGGTTTATTTGACAGATATGGTAGAACTTACAGATGAAATAGCCGCAACTTTAGTTCAAGGTGAAGGTGTGGACACTATGACAGTGACAGATAAGGGAGTGACTGAAGCAAGAGATCAAGTCACTCGAGCTGTTCAGTCATATATAGGGGAAAATGGTGAGGGAATCACTCTCAGGCGAATGCTAGCTCTCTCGACGTTCAATGGCATGTCTCAGGACATCTGCATTTTGGCAGAGGATTTAATGGTTGCCCTTATTGTACTGCCATTTCACAAAAGCCAAAGACCAGATGGGAAGCTCGATGGCGGCCACGCCGGTTTTCGTTATGTCAATCGCAAGGTTATGAGGACCGCACCATGCTCGGTTGGAATCCTCGTGGATAGAGGTCTCGGATTGGTCGAGAAGATAACAAGATCATATGTACTGCTCAACGTAGCAGTAATCTTCATAGGGGGCAAGGACGATAGAGAAGCATTGGCCTATGCAGGCCGAGTAGCAAGACATCCAGGAGTAAAGCTCACTGTAATAAGATTCTTGGTAGATACTGACTCGGACAATCCGGCCAGAAGAGCCAACACTTACAGAGTCGATGCTGCCGAGCAAGAACAAGAAATGAGACAAGACGACGAATGTTTTGCGCAGTTTTACGAACGACATGTTTCGGCCGGTCACGTTTCGTATGTTGAGAAACATCTTGCTAATTCTTCCGAGACTTATTCGACTTTGAGATCATTTGAAGGATTGTATTCTCTTATTATAGTCGGTCGGGGCGGAAGGGTGAACTCTTTGTTGACGTTCGGTATGAGCGACTGGCAGCAGTGCCCGGAGTTGGGTCCGATAGGGGATGTTCTTTCTGGGTCTGATTTTTCGGTGAAGACCTCGGTTTTGATCATACAACAACACAATCTCAAAGGAGAGTTAGATGGTCTTGATGATGACTTTTCAATCATGTAA 2415 42.9 RGRRRREREEERMAYGKTHGLDRSSQEITCSVWLTEIFRQAAKHVLSFFLMVGLCNGMHYLLRPLSQPRITSDTFVGLIIGNLGFIQKHLNISTTTSLRYIIDFGMLCYMFVLGLEMDPSILFTAPTRDAKVAYAGMLSTFVLAFSITPFLHYSKVKEMSFILSLSTSLCGTASPVLTRLITNLKIGKSDIGRLVISAGMYSDFMSTLLICIGYLFCRCQEVPISIKNGLEISGMILVQTVIAAKISPIFMNWVNNENPEGKPMKGSHLVLSVAFMAFICCCPVLFGYNPILSSFIGGTFLPREGRVSRWVVGKINYLLNTIFYPIFFFWMGVECQLSDFQPGHIWTWIRLFLLFAIVTAGKVAGTVISGVFLGFHWPESVALGLLLTVKGHFHIYMAIAAKTAGKTTTSTTTAMIIVIFFTVVHAPTVVAHIIERARKRAPTHRMALQLLDPLNELRILLCLHGPQNVPSTVNFMEISKGTADPGIVVYLTDMVELTDEIAATLVQGEGVDTMTVTDKGVTEARDQVTRAVQSYIGENGEGITLRRMLALSTFNGMSQDICILAEDLMVALIVLPFHKSQRPDGKLDGGHAGFRYVNRKVMRTAPCSVGILVDRGLGLVEKITRSYVLLNVAVIFIGGKDDREALAYAGRVARHPGVKLTVIRFLVDTDSDNPARRANTYRVDAAEQEQEMRQDDECFAQFYERHVSAGHVSYVEKHLANSSETYSTLRSFEGLYSLIIVGRGGRVNSLLTFGMSDWQQCPELGPIGDVLSGSDFSVKTSVLIIQQHNLKGELDGLDDDFSIM 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12467726 12471977 + Bpe002857.1 Bpe10g00541 109663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00541 804 CDD USP_Like 631 746 - -
Bpe10g00541 804 PANTHER CATION/H + ANTIPORTER 32 801 - -
Bpe10g00541 804 Gene3D - 504 751 - -
Bpe10g00541 804 Pfam Sodium/hydrogen exchanger family 55 434 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bpe10g00541 804 PANTHER CATION/H(+) ANTIPORTER 28 32 801 - -
Bpe10g00541 804 Gene3D - 40 443 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00541 Bpe-Chr10:12467726 Bpe11g00238 Bpe-Chr11:1630882 4.26E-131 dispersed
Bpe10g00541 Bpe-Chr10:12467726 Bpe07g00084 Bpe-Chr7:622519 1.06E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00541 - - csv:101211645 1231.08