Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00547 GAAGTACAGCCAAAAACCATCAAAAGCATGGGCAGTCAGGTGTGCCAGATCTGTGGAGACAGTGTTGGGAAGACCGTGGATGGTGAAGCATTCACAGCTTGCAACATTTGTGCTTTTCCTGTATGCAGGCCATGCTATGAATACGAAAGGAAGGATGGAAATCAGTCTTGCCCTCAGTGCAAAACCAGATACAAGAGGCACAAAGGTAGTCCTGCCATTCTCGGTGATGAAGAAGAGGATGCCGAAGATCATGATGTTGTTAGCGATATCAATTACAATGCTGAAAGCCAAAACCAGAAGCAGAAAATTGCAGAGCGTATGTTAAGTTGGCAGATGACGTATGGACGGGCAGAAGATCTTGGACCTGCAAGTTATGACAAGGAGATTTCTACCAATCACATTCCACGTCTAACCAATGGGCAAGAGGTTTCTGGAGAATTATCTAATGCATCCCCCGAACGTCTTTTTATGGCATCTCCTGGAGTATCTGGAGGGAAGCGAATTCATGCGCTTCCTTACGCAGCTGACATAAACCAATCTTCCAATGTGCGGGTTGTGGATCCTGCAAGGGAATTTAGCTCACCAGGCTTGGGCAATGTAGCTTGGAAAGAGAGAGTTGATGGATGGAAGATGAAGCAAGAAAAGAATGTTGTCCCAATGAGTACTGGTCAAGCTGCATCTGAAAGGGGAGGTGGAGATATTGATGCCAGCACTGACGTGCTTGTGGATGATTCCTTACTGAATGACGAAGCACGGCAGCCTCTTTCAAGAAAGGTGTCTGTTCCATCATCTCGGATAAACCCTTATAGAATGGTCATTGTTCTGCGGCTGGCTATTCTTTGTATTTTCCTGCATTACCGAATAACTAATCCTGTGCCAAATGCCTATGCTCTGTGGCTTATATCTGTTATATGTGAGATTTGGTTTGCTCTTTCTTGGATATTAGATCAGTTCCCTAAGTGGCTTCCTGTTAATCGGGAAACATATCTTGATCGGCTTGCTCTAAGATATGACAGGGAAGGAGAACCATCACAGCTAGCTGCTGTTGATATTTTTGTGAGTACTGTCGACCCATTAAAGGAGCCTCCTCTCGTGACAGCCAATACTGTGCTCTCAATTCTTGCTGTTGACTACCCAGTTGACAAGGTCTCCTGCTATCTTTCTGATGATGGATCTGCTATGTTGACATTTGAAGCTTTATCTGAAACATCAGAATTTGCTAGGAAATGGGTTCCCTTTTGCAAAAAATATAGCATTGAACCTCGAGCTCCAGAATGGTACTTTGCTCAAAAAATTGACTACCTGAAGGACAAAGTCCATCCATCATTTGTGAAAGATCGTAGAGCTATGAAGAGGGAGTATGAGGAATTTAAGGTTCGTGTTAATGGTCTGGTGGCAAAGGCACAGAAGGTTCCTGAAGAAGGATGGATTATGCAAGATGGAACACCATGGCCTGGGAATAATGTTAGAGATCACCCTGGGATGATTCAGGTTTTCTTAGGCCAAAGTGGAGGACTAGATGCTGAAGGTAATGAACTGCCACGACTAGTCTATGTCTCCCGTGAAAAGCGTCCTGGCTTCCAGCATCATAAGAAAGCTGGTGCTATGAATGCACTTGTTCGAGTGTCAGCAGTACTTACCAATGGGCCTTTCCTGTTGAATCTTGATTGTGATCACTACATAAACAATAGCAAAGCCTTGAGAGAAGCAATGTGTTTTATGATGGATCCTAACCTTGGGAAATATGTCTGCTATGTTCAATTTCCACAGAGGTTTGATGGTATTGACAAGAATGACCGATATGCTAACCGTAATACTGTGTTCTTTGATATTAATTTAAGAGGTTTGGACGGAATTCAAGGGCCAGTTTATGTGGGTACTGGTTGCGTCTTCAATAGAACTGCTTTATACGGTTATGAACCTCCTCTAAAGCCAAAGCATAAAAAACCTGGGTTGCTGTCTTCACTCTGTGGAGGGTCTCGAAAGAAAAACTCAAAATCAAGCAAGAAGGGCTCAGACAAAAAGAAATCTGGGAAGCATGTTGATCCCACTGTACCAATCTTTAGTCTTGAAGACATTGAAGAAGGGGTAGAAGGTGCAGGATTTGATGATGAGAAGTCGCTACTGATGTCACAAATGAGCTTGGAGAAAAGATTTGGTCAGTCCGCTGTTTTTGTTGCCTCTACCCTCATGGAAAATGGTGGTGTTCCTCAGTCTGCGACTCCAGAAACTCTTCTTAAAGAGGCAATTCATGTTATTAGCTGCGGCTACGAGGACAAATCAGATTGGGGAACTGAGATTGGATGGATATACGGCTCTGTCACTGAAGATATTCTTACAGGATTCAAGATGCATGCCCGTGGATGGCGCTCAATTTATTGCATGCCTAAGCGTCCGGCTTTTAAAGGTTCTGCTCCAATTAATCTTTCAGATCGTTTGAATCAAGTGCTTCGGTGGGCTCTAGGTTCAGTGGAAATTCTGCTAAGCAGACATTGTCCAATCTGGTACGGTTATGGTGGTAGGCTTAAGTGGCTTGAAAGGTTTGCATACGTCAACACTACCATTTATCCAATCACCGCCATCCCTCTTCTTATGTACTGTACATTGCCTGCTGTCTGTCTGCTGACAAACAAATTCATTATTCCACAGATTAGTAACATTGCAAGTATATGGTTCATATCTCTCTTCCTTTCCATCTTTGCTACTGGTATTCTGGAGATGAGATGGAGTGGCGTGGGAATCGATGAGTGGTGGAGAAACGAACAGTTTTGGGTTATTGGTGGAGTTTCAGCCCATCTTTTTGCAGTTTTCCAAGGTTTGCTCAAAGTTCTTGCTGGAATTGACACTAACTTCACTGTTACATCCAAGGCATCTGACGAAGAGGGTGATTTTGCTGAACTCTACTTGTTCAAATGGACGACCCTTCTTATCCCGCCCACCACTCTCCTCATTGTAAACTTGGTCGGGGTTGTAGCCGGTATATCCTATGCGATCAACAGCGGATATCAATCTTGGGGTCCGCTCTTCGGGAAGCTTTTCTTTGCCTTCTGGGTGATTATCCATCTCTATCCCTTCCTCAAAGGTTTCATGGGTAGGCAGAATAGGACACCCACAATTGTTGTCGTCTGGTCGATCCTCCTCGCTTCAATTTTCTCCTTGTTATGGGTCCGAATTGATCCATTTACAACTTCAGTTACTGGTCCCGATGTCGAGCAATGTGGAATCAACTGCTGA 3234 44.03 EVQPKTIKSMGSQVCQICGDSVGKTVDGEAFTACNICAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAILGDEEEDAEDHDVVSDINYNAESQNQKQKIAERMLSWQMTYGRAEDLGPASYDKEISTNHIPRLTNGQEVSGELSNASPERLFMASPGVSGGKRIHALPYAADINQSSNVRVVDPAREFSSPGLGNVAWKERVDGWKMKQEKNVVPMSTGQAASERGGGDIDASTDVLVDDSLLNDEARQPLSRKVSVPSSRINPYRMVIVLRLAILCIFLHYRITNPVPNAYALWLISVICEIWFALSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYLSDDGSAMLTFEALSETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRVNGLVAKAQKVPEEGWIMQDGTPWPGNNVRDHPGMIQVFLGQSGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKYVCYVQFPQRFDGIDKNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLLSSLCGGSRKKNSKSSKKGSDKKKSGKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITAIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEEGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGFMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTSVTGPDVEQCGINC 1077
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12530451 12536320 + Bpe002862.1 Bpe10g00547 109669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00547 1077 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 486 640 IPR029044 -
Bpe10g00547 1077 MobiDBLite consensus disorder prediction 646 682 - -
Bpe10g00547 1077 PANTHER CELLULOSE SYNTHASE 5 1077 - -
Bpe10g00547 1077 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 1077 - -
Bpe10g00547 1077 SUPERFAMILY Nucleotide-diphospho-sugar transferases 363 889 IPR029044 -
Bpe10g00547 1077 CDD mRING-HC-C4C4_CesA_plant 13 63 - -
Bpe10g00547 1077 SUPERFAMILY RING/U-box 4 85 - -
Bpe10g00547 1077 Pfam Cellulose synthase 349 1070 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bpe10g00547 1077 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 89 IPR013083 -
Bpe10g00547 1077 Pfam Zinc-binding RING-finger 5 80 IPR027934 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00051 Bpe-Chr4:446891 Bpe10g00547 Bpe-Chr10:12530451 0 dispersed
Bpe04g00544 Bpe-Chr4:3449381 Bpe10g00547 Bpe-Chr10:12530451 0 dispersed
Bpe10g00547 Bpe-Chr10:12530451 Bpe13g01174 Bpe-Chr13:17147738 0 dispersed
Bpe10g00547 Bpe-Chr10:12530451 Bpe02g00568 Bpe-Chr2:3665264 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00547 K10999 - zju:107417605 2028.06