Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00552 ATGGTTGATCATGTTCAACATCCAACTGTCTTTCAGAAGGTAGCTGGCCAGTTCCACCTCCGATCCAGTGTTTCCTCTGATTTTTATGGCTCTGATGCTACTAGCTTAAGAAATCCTGCGCTGTACCAGAGACATGCTAGATATGGAAACTACTCCAATGGTGCATTGCAGCTACCTTTGGTGCCATCAAGTAGAAGTGGCATTGATGTCTCTAATGTTGCATCAACAGCTTCTCCTATTTTTGTTCAAGCCCCAAAAGAGCAAAGTAAATTCATAATTGATTTCTTTATGGGTGGAGTCTCTGCTGCTGTGTCCAAAACTGCAGCTGCCCCAATTGAGCGTGTGAAGCTTTTAATTCAGAACCAGGATGAGATGATTAAATCTGGCAGACTTTCTGAGCCTTACAAAGGAATTGGTGATTGCTTTGGTCGAACTATTAAGGAGGAAGGTTTTGGTTCATTGTGGAGGGGGAACACCGCTAACGTCATCCGATATTTTCCCACTCAAGCCTTAAACTTTGCATTTAAGGATTACTTTAAGAGGCTTTTCAACTTCAAAAAAGATAAAGATGGTTACTGGAAATGGTTTGCTGGCAACTTGGCATCAGGTGGTGCTGCTGGTGCTTCCTCCCTTCTATTTGTTTACTCTCTCGACTATGCTCGTACTCGTTTGGCCAATGATGCAAAAGCTGCAAAGAAAGGTGGAGAAAGACAGTTCAATGGCCTGATTGATGTCTACAGGAAGACGTTAAAATCTGATGGTATTGCTGGTCTTTACCGTGGATTCAACATTTCTTGTGTTGGTATCATTGTGTACCGTGGTCTGTACTTTGGAATGTACGACTCCCTGAAGCCAGTTCTTTTGACTGGATCATTGCAGGATAGCTTCTTTGCTAGCTTTGCCCTTGGTTGGCTCATCACTAATGGTGCTGGCCTTGCATCATACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCTGGTGAAGCGGTCAAGTACAAGAGCTCATTGGATGCATTTTCTCAGATTTTGAAGAATGAGGGTGCAAAGTCTCTCTTCAAGGGTGCTGGCGCAAACATCCTCCGTGCTATTGCTGGTGCTGGTGTGCTTGCAGGTTATGATAAGTTACAGCTGATAGTCTTCGGAAAGAAATATGGATCTGGTGGTGCTTAA 1176 43.54 MVDHVQHPTVFQKVAGQFHLRSSVSSDFYGSDATSLRNPALYQRHARYGNYSNGALQLPLVPSSRSGIDVSNVASTASPIFVQAPKEQSKFIIDFFMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFGRTIKEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQLIVFGKKYGSGGA 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12565248 12566880 - Bpe002866.1 Bpe10g00552 109674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00552 391 Gene3D Mitochondrial carrier domain 92 387 IPR023395 -
Bpe10g00552 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 194 286 IPR018108 -
Bpe10g00552 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 294 380 IPR018108 -
Bpe10g00552 391 PRINTS Mitochondrial carrier protein signature 94 107 IPR002067 GO:0055085
Bpe10g00552 391 PRINTS Mitochondrial carrier protein signature 107 121 IPR002067 GO:0055085
Bpe10g00552 391 PRINTS Mitochondrial carrier protein signature 209 227 IPR002067 GO:0055085
Bpe10g00552 391 PRINTS Mitochondrial carrier protein signature 157 177 IPR002067 GO:0055085
Bpe10g00552 391 PRINTS Mitochondrial carrier protein signature 259 277 IPR002067 GO:0055085
Bpe10g00552 391 PRINTS Mitochondrial carrier protein signature 303 325 IPR002067 GO:0055085
Bpe10g00552 391 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 391 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe10g00552 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 89 182 IPR018108 -
Bpe10g00552 391 PRINTS Adenine nucleotide translocator signature 168 180 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe10g00552 391 PRINTS Adenine nucleotide translocator signature 299 315 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe10g00552 391 PRINTS Adenine nucleotide translocator signature 135 156 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe10g00552 391 PRINTS Adenine nucleotide translocator signature 91 103 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe10g00552 391 PRINTS Adenine nucleotide translocator signature 194 207 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bpe10g00552 391 Pfam Mitochondrial carrier protein 193 289 IPR018108 -
Bpe10g00552 391 Pfam Mitochondrial carrier protein 89 186 IPR018108 -
Bpe10g00552 391 Pfam Mitochondrial carrier protein 295 379 IPR018108 -
Bpe10g00552 391 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 391 - -
Bpe10g00552 391 SUPERFAMILY Mitochondrial carrier 88 376 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00493 Bpe-Chr2:3191748 Bpe10g00552 Bpe-Chr10:12565248 3.14E-64 dispersed
Bpe04g00125 Bpe-Chr4:845726 Bpe10g00552 Bpe-Chr10:12565248 1.66E-63 dispersed
Bpe10g00552 Bpe-Chr10:12565248 Bpe14g00265 Bpe-Chr14:2731960 8.73E-33 dispersed
Bpe12g00255 Bpe-Chr12:2418066 Bpe10g00552 Bpe-Chr10:12565248 0 transposed
Bpe13g00317 Bpe-Chr13:11043411 Bpe10g00552 Bpe-Chr10:12565248 2.69E-131 transposed
Bpe10g00552 Bpe-Chr10:12565248 Bpe11g00092 Bpe-Chr11:633404 3.28E-166 wgd
Bpe10g00552 Bpe-Chr10:12565248 Bpe03g00545 Bpe-Chr3:25727431 0 wgd
Bpe10g00552 Bpe-Chr10:12565248 Bpe06g00632 Bpe-Chr6:17099667 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00552 K05863 - egr:104454664 665.225