Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00580 ATGGCGACCGAAACGAAGCCGGGTGATTTCATCTTTAGGTCCAAGCTTCCCGATATTTCGGTCCCGAAGCATCTCCCTCTCCACGCGTATTGTTTCGAGAACATAGCCGAGTTTGGGTCTCGAACGTGTTTGATAAACGGCTCTACCGGAGAGAAATATACTTACGATGAAGTCCGGCGGACGTCGATCAAGGTCGCGAAGGGGCTGAGTAAACTCGGGTTCGGAAAAGGCGACGTGGCGATGCTCTTGGTACCAAATTCACCGGAATTTGTCTTCGTCTTTTTGGCTACTTCGTTTCTCGGCGCGATCACGACCGCCGCGAACCCGTTCTTCACCCCTGCCGAGATCGAAAAGCAAGTGAAAGCTTCGAAAGCGAAAATCATCATAACTCAAGCTTCATTCTACCCCAAAGTAAAGCATTTAGCTCAGGAATCTGAACCAAACAGTGTCAAGATAATCTGCACTGATTCAGCCATAGATGGCTGCCTGCAACTTTCTTCTGTAATCGAAGACGATGACGAAACAGCCATACCCGACGTCAAGATCAACCCAGATGACGTCGTTGCACTGCCATATTCGTCAGGCACAACAGGATTTCCAAAAGGAGTAATGTTAACCCACAGAGGGCTAGTAACAAGTGTCTCTCAGCAAGTAGACGGAGATAATCCAAACCTGTACTACCACAAAGACGATGTCGTTCTCTGCGTGCTGCCTCTGTTTCATATTTACGCTCTGAACTCCGTGTTTCTCTGCTCTTTGAGAGTGGGAGCCGCCGTTCTGATCTTGCAGAAGTACGAAATAGTTTCGTTTCTGCAGATGATAGAGAAGTACAAGGTTTCCTCCGTGCCGGTGGTTCCGCCGATAGTGTTAGCCATGGCTAGGTCGCCGGAGGTTGATAAGTACGATCTTTCTTCTATTCGGGTGCTGAAATCTGGCGGGGCTCCTCTGGGGAAGGAGATCGAGGACTGCGTGAAATCCAAGTTTCCCATGGCCGTGTTTGGTCAGGGATACGGAATGACGGAGGCAGGCTCGGTTCTGACGATGAGTTTAGGATTTGCAAAGCGACCATGGAAAGTAAAAGCTGGCGCCTGTGGAACCGTCGTAAGAAATGCAGAGATGAAGATTGTTGATACTGAAACTGGAGCTTCGTTGCCTTATAATTCTCATGGCGAAATTTGCATTAGAGGAGACCAAATCATGAAAGGTTGTTATCTGGATGATCCGGAGGCGACGGCTAGGACGATAGACGAAGAAGGATGGCTGCACACCGGCGATATAGGCTTCATAGACGAAGACGACGAGCTTTTCATCGTCGATAGGCTGAAGGAACTCATCAAATTCAGAGCGTTTCAGGTCGCTCCGGCTGAGCTGGAAGCCATTTTACTCACCCACCCCTCCATCTCCGACGCCGCCGTCGTCCCAAGGTACAGGACAGGTTATGTTTGGCAAGATTTAGTAGACAACGATCTTATCACCCCAATTTCTGACAACGAGTATGTTCTTAAAGGATCCGAAGTCATTCCTCCAGATTCTCGCTCAAATTCCTTCGACGAAAAGAGGGTTTCCATAATCAAAGAAGGCTCAATTGAAGCCGTGATTGAAGATAAACTCCAACCAAATGACGAAAATAACGATGACCCAGAAAAAAAATCAGAAACTCGATTAAAGGCCTCGTCCGATATAATCGAGGAATCGCCTCCTTTCAGCTCAGGGAGGTCGACAATCACAGAAGAATACGATTCAGCAAAGCTGGAAGAGAAGAGTTCAGACACGATCGAAGAGAAACCAGAAGAAGAGAGCGAGACATTGAAAAATCAATCTTCTTTCTATTCCATTCTGCTCAGGAAGAAGAAGATCAAGAAGAAGAAGAAGAAGAAGAGAGAAAGCGAAGAAAAAGATAATACAAATACTCCTAAATCGTCAGCATCGAACACGTCATCGTCTTCCTCGCAATCTTCATTCAGAAAGAGCAACGGAAGTTCTTCCTCGATGCTTCGAAATTTGATGGGATGTGGCGCTGTGGTTACAAACGACGCCGTTCTGGTCTCGGTGCATCGGGCTGACAAAACGGCGTCGAATGATTCCGATACCACTTCTAAATTTTGTGTCGGAGACAAGACGGGAATGTCCGCCAGAGTTTTCGGGACATGCTGGGACGAACCACTCGACCTCCAGCAGCCGCCACAGCAATTACAGCGACGATCCAGTGCTCGCAGAAGGAGAAGCTGTGATTTTGGACAAGAAACAAGGAAGAAAAGCGACCAAGAATTCACCGGCCGGAAGTCTGCTTCCTCCGCTTGCAAGCCTGCCGGAGGGCCAAGCTGCTCGCAATGTGGGAAAACTTTCCGGCCAGAGAAACTGCATGCACACATGAAGTCATGCAGAGGAATAAAATGTACGGCAAAGACAGAGAAGACACCATCATCGAAGCCACCGGCTTCTTCCTCCGGCAACCTCTTGACAGACATAAACATATGA 2478 48.18 MATETKPGDFIFRSKLPDISVPKHLPLHAYCFENIAEFGSRTCLINGSTGEKYTYDEVRRTSIKVAKGLSKLGFGKGDVAMLLVPNSPEFVFVFLATSFLGAITTAANPFFTPAEIEKQVKASKAKIIITQASFYPKVKHLAQESEPNSVKIICTDSAIDGCLQLSSVIEDDDETAIPDVKINPDDVVALPYSSGTTGFPKGVMLTHRGLVTSVSQQVDGDNPNLYYHKDDVVLCVLPLFHIYALNSVFLCSLRVGAAVLILQKYEIVSFLQMIEKYKVSSVPVVPPIVLAMARSPEVDKYDLSSIRVLKSGGAPLGKEIEDCVKSKFPMAVFGQGYGMTEAGSVLTMSLGFAKRPWKVKAGACGTVVRNAEMKIVDTETGASLPYNSHGEICIRGDQIMKGCYLDDPEATARTIDEEGWLHTGDIGFIDEDDELFIVDRLKELIKFRAFQVAPAELEAILLTHPSISDAAVVPRYRTGYVWQDLVDNDLITPISDNEYVLKGSEVIPPDSRSNSFDEKRVSIIKEGSIEAVIEDKLQPNDENNDDPEKKSETRLKASSDIIEESPPFSSGRSTITEEYDSAKLEEKSSDTIEEKPEEESETLKNQSSFYSILLRKKKIKKKKKKKRESEEKDNTNTPKSSASNTSSSSSQSSFRKSNGSSSSMLRNLMGCGAVVTNDAVLVSVHRADKTASNDSDTTSKFCVGDKTGMSARVFGTCWDEPLDLQQPPQQLQRRSSARRRRSCDFGQETRKKSDQEFTGRKSASSACKPAGGPSCSQCGKTFRPEKLHAHMKSCRGIKCTAKTEKTPSSKPPASSSGNLLTDINI 825
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12764074 12770551 - Bpe002893.1 Bpe10g00580 109702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00580 825 SUPERFAMILY Acetyl-CoA synthetase-like 15 476 - -
Bpe10g00580 825 Pfam AMP-binding enzyme 33 447 IPR000873 -
Bpe10g00580 825 Pfam Protein SOSEKI, plant 476 672 IPR010369 -
Bpe10g00580 825 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 475 - -
Bpe10g00580 825 MobiDBLite consensus disorder prediction 636 662 - -
Bpe10g00580 825 MobiDBLite consensus disorder prediction 802 825 - -
Bpe10g00580 825 Gene3D - 442 486 IPR045851 -
Bpe10g00580 825 MobiDBLite consensus disorder prediction 618 662 - -
Bpe10g00580 825 MobiDBLite consensus disorder prediction 536 559 - -
Bpe10g00580 825 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 6 475 - -
Bpe10g00580 825 MobiDBLite consensus disorder prediction 721 781 - -
Bpe10g00580 825 Gene3D - 2 441 IPR042099 -
Bpe10g00580 825 MobiDBLite consensus disorder prediction 536 606 - -
Bpe10g00580 825 MobiDBLite consensus disorder prediction 578 602 - -
Bpe10g00580 825 CDD 4CL 21 474 - -
Bpe10g00580 825 MobiDBLite consensus disorder prediction 737 758 - -
Bpe10g00580 825 MobiDBLite consensus disorder prediction 800 825 - -
Bpe10g00580 825 MobiDBLite consensus disorder prediction 563 577 - -
Bpe10g00580 825 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01356 Bpe-Chr8:14684354 Bpe10g00580 Bpe-Chr10:12764074 4.85E-06 dispersed
Bpe10g00580 Bpe-Chr10:12764074 Bpe11g00825 Bpe-Chr11:6153213 3.04E-107 dispersed
Bpe10g00580 Bpe-Chr10:12764074 Bpe06g00659 Bpe-Chr6:17301514 0 wgd
Bpe10g00580 Bpe-Chr10:12764074 Bpe09g00463 Bpe-Chr9:12619951 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21953 PF00501 AMP-binding 3.10E-103 CL0378 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00580 K01904 - qsu:112001847 689.878