Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00586 CAATCTTTCATTTGTTGGAATTCGTTAATGGGGAAGATTTCGCAGCAGAATCAGAGCAACTTCGCCACTGTTAACAGTAGTAACAAGGAGAAGGTGAAGAAGAGGACTCGTAAAAGTGTTCCTCGCGATGCTCCTCTGCAGCGGAGCTCCGTCTATCGCGGAGTTACCAGACATCGATGGACGGGGAGATACGAGGCTCATCTGTGGGATAAGAACTGCTGGAATGAATCGCAGAATAAGAAAGGAAGACAAGGTGCCTACGACGATGAAGAAGCAGCAGCTCATGCTTATGATTTGGCAGCTTTAAAGTACTGGGGACAGGAAACCATTCTTAATTTTCCACTAGAAACGTACGAGGAGGAGCTCAGCCAAATGGAAGGCCAATCCAAAGAAGAATATATTGGATCATTGAGAAGCAGGAAAAGTAGCGGGTTCTCTCGAGGAGTCTCGAAATACAGAGGCGTAGCAAGACATCACCACAACGGTAGATGGGAAGCCCGGATTGGTCGAGTATTTGGCAATAAGTATCTCTACCTTGGGACTTATGCTACCCAAGAAGAAGCTGCAACGGCTTACGATATGGCAGCGATAGAGTATCGCGGTCTTAACGCCGTTACGAACTTTGACCTCAGCCGTTATCTTAAATGGCTTCGCCCGAATGCTGACGGTCAAAGCAACGACGCTAACGGCCCTATTAAATCTAACCAAGATATCCTGCCTGACGCGGGTGCCGCCAATGACCCGGTTCCTAGCCCTACCTTTCAGCTCGGGTTCTCCTTTCTGCCTCGTGACCAGCAGTGCTCTGATGACGGAGAAACTGACGCCCACTCGCTACCGCCGCGATCCGGCGTGGCCGCATCTGCATCGTCGGCTTTAGGTCTTCTATTGCAGTCGTCGAAGTTCAAAGAGATGATGGAGAGAACGTCGGGGGCTGAGTGTCCACGGATACGGACGGAATCGACCGATCCGCCGCGAAGCAGCTTTCCCGACGATATTCAGACCTATTTTGACTGCCAAGATTCCAGCAACTACACAGACGGAGACGATAGTATTTTCGCTGATCTGAATTCCTTCGCATCGCCCATCTTTCATTGCGAGCTCGATGGTTAG 1110 50.18 QSFICWNSLMGKISQQNQSNFATVNSSNKEKVKKRTRKSVPRDAPLQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGQETILNFPLETYEEELSQMEGQSKEEYIGSLRSRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYLKWLRPNADGQSNDANGPIKSNQDILPDAGAANDPVPSPTFQLGFSFLPRDQQCSDDGETDAHSLPPRSGVAASASSALGLLLQSSKFKEMMERTSGAECPRIRTESTDPPRSSFPDDIQTYFDCQDSSNYTDGDDSIFADLNSFASPIFHCELDG 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12813198 12815483 + Bpe002899.2 Bpe10g00586 109708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00586 369 MobiDBLite consensus disorder prediction 24 45 - -
Bpe10g00586 369 ProSiteProfiles AP2/ERF domain profile. 151 209 IPR001471 GO:0003700|GO:0006355
Bpe10g00586 369 PRINTS Ethylene responsive element binding protein signature 191 211 IPR001471 GO:0003700|GO:0006355
Bpe10g00586 369 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Bpe10g00586 369 ProSiteProfiles AP2/ERF domain profile. 51 114 IPR001471 GO:0003700|GO:0006355
Bpe10g00586 369 CDD AP2 150 211 IPR001471 GO:0003700|GO:0006355
Bpe10g00586 369 SMART rav1_2 151 215 IPR001471 GO:0003700|GO:0006355
Bpe10g00586 369 SMART rav1_2 51 120 IPR001471 GO:0003700|GO:0006355
Bpe10g00586 369 MobiDBLite consensus disorder prediction 224 246 - -
Bpe10g00586 369 SUPERFAMILY DNA-binding domain 50 116 IPR016177 GO:0003677
Bpe10g00586 369 Pfam AP2 domain 50 106 IPR001471 GO:0003700|GO:0006355
Bpe10g00586 369 Pfam AP2 domain 150 201 IPR001471 GO:0003700|GO:0006355
Bpe10g00586 369 PANTHER AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR 10 355 - -
Bpe10g00586 369 SUPERFAMILY DNA-binding domain 150 211 IPR016177 GO:0003677
Bpe10g00586 369 Gene3D AP2/ERF domain 150 211 IPR036955 GO:0003700|GO:0006355
Bpe10g00586 369 Gene3D AP2/ERF domain 51 116 IPR036955 GO:0003700|GO:0006355
Bpe10g00586 369 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 355 - -
Bpe10g00586 369 MobiDBLite consensus disorder prediction 265 284 - -
Bpe10g00586 369 MobiDBLite consensus disorder prediction 308 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00656 Bpe-Chr1:4475781 Bpe10g00586 Bpe-Chr10:12813198 2.74E-120 dispersed
Bpe10g00586 Bpe-Chr10:12813198 Bpe13g00463 Bpe-Chr13:12161863 3.07E-97 dispersed
Bpe10g00586 Bpe-Chr10:12813198 Bpe14g00190 Bpe-Chr14:2219259 7.17E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21954 PF00847 AP2 1.90E-09 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00586 K09285 - pop:112326885 488.419