Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00587 ATGGAAGCTGCTTCTAAGAAAGCCCATACGCCTCGCCAATCATCTTACAACTCCCGCCATGTGAGCCCTCTGAGCAGTCTCAGGCACTGCCGTAGCTCCAGCGGAGGAGGCCGGTTAACCTCCATTGAAACCGCTCTGGATGACCTTTCAAACCGAAATATTGAGAATGCTGAACCCAACAAGAAGGAGACTGAGAGTTGTTTGTTCGTGGGAAAGGAAAACGTGTTTCCCTCCAATGGAGTTTCTGCTAAGCCCAACACGATTTTAGATTTCAAGTCTTTCTCGACGGGAAGCGCGTTGAAGCCATCCTCCCTGCAGCTCTGCATGCAAATCAACGAGCCGGAGAAGGTTTTCGGGTCTAAGTTATTGTGCACGACGGACTCAGAACACTCGGCCACACTGAAGATTTGGGACTATTCCGATTCAGAGGCGGCTCCTGCTTCGTCCTGGTCGACTTTGCCGAACAGGTCGTTGCTGTGTCGGCCATTGCCTTTGGATATCGGAAAATGTACTTGTGTTATAGTCAAGGAAGCTTTACCAGATGGCATCCATAGCGGCGCTCTCTATTCCCTTTACACCAATGAAGGGCAGGGACGACAGGACCGGAAATTAGCCGTTGCCCTCCACAAACGACATAATGGGAAGTCAGGTTTCACTATAGCTCAGAACATTAAAGGGATAGCCCCTAAGGCTGATGATAGTTTCATAGGATCCATTACTTCAAATCTCATGGGCTCCAAATATCAATTATGGGACCAGGGGAGTCGTGCAAAATCCCCAAGCACCCAATCTATATCACTTCTGGCTGCTGTTAAATTTGTGCCAACAGTCACCACCTGGACAGGAAGCCATAGAAGCATGAGAGCTTACGTACCAAAACATCAATCAATGCAGCTAAAAAGCACGACCCAAGCGCAACACATTGCTGGACTGCCAGAGGGGTGGGAAGAACAAAAAGAGAAAGTCCATCAGCTCTTTTCTATAGTTCCTCACTACAACAAGATTTCAAAACAATATGAGTTGGACTTCAGAGACAAAGGTAGAGCAGGACTTCAAATCCTGAGGTCAGTCAAAAACTTTCAGCTGACGATGGAGAACAATGGAAAGCAGACAATCCTGCAGCTTGGAAGGGTTGGGAAGTCAAAATACGTGATGGACTACAGATTCCAAGCTTTGTTGCACAGTGTAATGAAAGCTGAATCTTTCTCATCGCTTTCGTTGTGTTCTATCTCAGAGCATGAAGCCATTGTTTTTCTTCGCCCTGTTGCTTAA 1272 47.17 MEAASKKAHTPRQSSYNSRHVSPLSSLRHCRSSSGGGRLTSIETALDDLSNRNIENAEPNKKETESCLFVGKENVFPSNGVSAKPNTILDFKSFSTGSALKPSSLQLCMQINEPEKVFGSKLLCTTDSEHSATLKIWDYSDSEAAPASSWSTLPNRSLLCRPLPLDIGKCTCVIVKEALPDGIHSGALYSLYTNEGQGRQDRKLAVALHKRHNGKSGFTIAQNIKGIAPKADDSFIGSITSNLMGSKYQLWDQGSRAKSPSTQSISLLAAVKFVPTVTTWTGSHRSMRAYVPKHQSMQLKSTTQAQHIAGLPEGWEEQKEKVHQLFSIVPHYNKISKQYELDFRDKGRAGLQILRSVKNFQLTMENNGKQTILQLGRVGKSKYVMDYRFQALLHSVMKAESFSSLSLCSISEHEAIVFLRPVA 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12815914 12817875 - Bpe024697 Bpe10g00587 109709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00587 423 MobiDBLite consensus disorder prediction 8 39 - -
Bpe10g00587 423 PANTHER TUBBY-LIKE PROTEIN 8 4 389 - -
Bpe10g00587 423 PANTHER TUBBY-RELATED 4 389 - -
Bpe10g00587 423 Pfam Tub family 160 389 IPR000007 -
Bpe10g00587 423 PRINTS Tubby superfamily signature 235 259 IPR000007 -
Bpe10g00587 423 PRINTS Tubby superfamily signature 348 364 IPR000007 -
Bpe10g00587 423 PRINTS Tubby superfamily signature 368 387 IPR000007 -
Bpe10g00587 423 Gene3D Tubby Protein; Chain A 155 395 IPR025659 -
Bpe10g00587 423 MobiDBLite consensus disorder prediction 1 39 - -
Bpe10g00587 423 SUPERFAMILY Tubby C-terminal domain-like 147 389 IPR025659 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21955 PF01167 Tub 3.10E-30 CL0395 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00587 K19600 - csv:101216780 512.686