Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00594 AGGTTGGATGATTTGGATTCTAATTTGTCAGTATCTTCCGGTACTCAAGGGATGAACAAGTGTAGATTTAATGTGATGGAAGGATTGCCCTTCACAGGTCGTGCAAAGAAAAATCCTTCAAAGTCTTTTAGGAAAGGAGTGAAGAAGGGATCAGATGGAATAATGACGTTTGGTCGAACACTTCGTTCCGGCGTCACTCGTGCTGTCTTCCCAGAAGATCTTAAAGTTTCCGAGAAAAAAATATTTGATCCTCAAGACAAATCACTCCTATTTTGGAACAAGCTGTTCGTCGTGTCTTGCATTCTTTCAGTATCAGTTGATCCTTTGTTTTTTTATCTGCCTGTCTTTAATCATGCATCTTATTGCCTTGGCATGGATACAAAGTTAGCAGTCACAATGACTACATTTCGGACAATTTTCGATGTCTTCTACCTTCTCAGAATGGGTTTCCAGTTCCGCACTGCTTTTATTGCACCGTCTTCTCGGGTATTTGGACGAGGTGAACTTGTTATAGATCCTACCGAGATAGCCAAGCGTTACCTGCAGCGCTATTTCATTATTGATTTGCTTTCTGTCCTGCCTATACCACAGGTTGTGGTGTGGAAGTTTCTTCAAAGATCGAAAGGCTCAGAGGTGTTGTCTACAAAAAAGGCGTTGCTGAACATCGTATTTCTCCAATATATTCCAAGATTCACCCGCTTTATACCTTTAAATATAGAGCTTAAAAAGACGGTTGGTGTATTTGCTGAAAGTGCTTGGGCAGGGGCTGCATACTATTTGCTGCTATATATGCTTGCTAGTCACATTGCTGGCTCATTTTGGTACCTACTAGCAGTGGAAAGAAATGAATTTTGCTGGAGAAATGCATGCATTAGTAGTGGGAGATGTAACATAAATTATTTGTACTGCGGCAACCGACACATGGAAGGTTATGTTGATTGGAAAAACATGAGCGAGAGTATTCTAAGAGGCAAGTGCTCGGCCCAAGGTGGAGGGCCATTCAATTACGGGATCTACACACTTGCTATATCTTCTGGCATTGTTAAATCCAGGACCTTTTTCCCCAAGTTCTGCTACTGCTTGTGGTGGGGCTTGCAAAACTTGAGGTATTGGCCGTTTATTTTCTGCAGTACACTTGGCCAGGGGCTTCAAACTAGTACATACCCCGGGGAGGTTGTATTTTCAATTTCTATAGCAATATCTGGACTTCTCCTCTTTGCTCTTCTTATAGGCAATATGCAAACTTACCTTCAATCTCTCACGGTTCGTCTTGAAGAGATGAGGATCAAAAGGAGGGACTCGGAGCAGTGGATGCATCATCGGTTACTTCCGCAAGAATTGAGGGAGAGAGTTAGACGGTATGATCTATACAAATGGTTGGAAACACGCGGGGTCGATGAAGAGAGCATCGTCCAAAGTCTGCCTAAAGATCTGAGGAGAGATATCAAAAGGCACCTTTGTTTGAATTTAGTCAGAAGAGTTCCCCTGTTTGCTAACATGGATGAGAGATTGTTAGATGCCATATGCGAGCGACTGAAACCGAGTTTGTATACGGAGAGTACGTACATAGTCAGGGAAGGAGACCCGGTTAATGAGATGATGTTCATTATACGTGGCCGCCTAGAAAGTGTAACAACAGATGGAGGGAGAAGTGGATTTTTCAATCGAGGGGTGCTGAAAGAAGGCGATTTTTGTGGAGAAGAGCTCCTAACATGGGCACTTGACCCCAAAGCTGGAGCCAATTTACCATCATCTACTCGAACAGTGCATGCTCTAACTGAAGTAGAGGCCTTTGCATTGGAAGCTGAAGAGCTGAAATTTGTGGCCAGTCAGTTTAGGCGTCTCCATAGCCGACAGGTTCAGCATACTTTCAGATTTTACTCGCAGCAATGGAGGACGTGGGCTGCATGCTTTATTCAGACTGGATGGAGGCGGTATTGCAGGCGGAAAATAGCTGAACAAAGACGTAAAGCAGAGGAGGAAGAAGAAGAAGAAGAAGAAGACAATTATGGCAGTGGAAAACCTTTAGTCAGGCGTAATTTTAGTTCATCAAGGCTTGGGGCAACCATTCTGGCATCCCGTTTTGCCGCAAATGCTCTGCGTGGTCATAGGCTTCGAAACCCGAGCATAAAAGCGTTGGTTAACCTGCAAAAGCCTCCGGAGCCAGACTTCTCTATCTACGAGGCAGATTAA 2193 43.91 RLDDLDSNLSVSSGTQGMNKCRFNVMEGLPFTGRAKKNPSKSFRKGVKKGSDGIMTFGRTLRSGVTRAVFPEDLKVSEKKIFDPQDKSLLFWNKLFVVSCILSVSVDPLFFYLPVFNHASYCLGMDTKLAVTMTTFRTIFDVFYLLRMGFQFRTAFIAPSSRVFGRGELVIDPTEIAKRYLQRYFIIDLLSVLPIPQVVVWKFLQRSKGSEVLSTKKALLNIVFLQYIPRFTRFIPLNIELKKTVGVFAESAWAGAAYYLLLYMLASHIAGSFWYLLAVERNEFCWRNACISSGRCNINYLYCGNRHMEGYVDWKNMSESILRGKCSAQGGGPFNYGIYTLAISSGIVKSRTFFPKFCYCLWWGLQNLRYWPFIFCSTLGQGLQTSTYPGEVVFSISIAISGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRLLPQELRERVRRYDLYKWLETRGVDEESIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFNRGVLKEGDFCGEELLTWALDPKAGANLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQTGWRRYCRRKIAEQRRKAEEEEEEEEEDNYGSGKPLVRRNFSSSRLGATILASRFAANALRGHRLRNPSIKALVNLQKPPEPDFSIYEAD 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12858504 12861261 + Bpe002906.1 Bpe10g00594 109716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00594 730 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 2 727 - -
Bpe10g00594 730 Coils Coil 644 669 - -
Bpe10g00594 730 CDD CAP_ED 496 627 IPR000595 -
Bpe10g00594 730 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 727 - -
Bpe10g00594 730 Gene3D - 99 421 - -
Bpe10g00594 730 SUPERFAMILY cAMP-binding domain-like 426 616 IPR018490 -
Bpe10g00594 730 SUPERFAMILY Voltage-gated potassium channels 84 418 - -
Bpe10g00594 730 Pfam Cyclic nucleotide-binding domain 517 606 IPR000595 -
Bpe10g00594 730 Pfam Ion transport protein 91 423 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe10g00594 730 SMART cnmp_10 496 627 IPR000595 -
Bpe10g00594 730 ProSiteProfiles cAMP/cGMP binding motif profile. 496 626 IPR000595 -
Bpe10g00594 730 MobiDBLite consensus disorder prediction 655 674 - -
Bpe10g00594 730 Gene3D Jelly Rolls 494 614 IPR014710 -
Bpe10g00594 730 Gene3D Helix hairpin bin 423 487 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00647 Bpe-Chr1:4382640 Bpe10g00594 Bpe-Chr10:12858504 0 dispersed
Bpe05g01029 Bpe-Chr5:22890356 Bpe10g00594 Bpe-Chr10:12858504 0 dispersed
Bpe07g01010 Bpe-Chr7:15746149 Bpe10g00594 Bpe-Chr10:12858504 8.31E-171 dispersed
Bpe10g00594 Bpe-Chr10:12858504 Bpe12g00588 Bpe-Chr12:11659486 0 dispersed
Bpe10g00594 Bpe-Chr10:12858504 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00594 K05391 - csv:101221166 1157.9