Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00595 ATGGTTGTCACTGGGTCTACTCATGGGCAGCAGCAATTCATTGCAAGCACTGGAAACAGAAGTGTTTCTAATGTGCCGTTGATTGAGAACTCAGATGCTGATCAGATTGTTGTTCCTGACAGGAAAAGCTGGAGAAATCTATTTGCTTACATGGGACCCGGATTTCTCGTTTCGATCGCCTATATCGACCCTGGAAATTTCGAAACTGATTTACAGTCGGGGGCACAATACAAATATGAGCTACTTTGGATCATACTAGTGGCTTCATGTGCTGCTCTTGTAATCCAATCATTGGCTGCCAATCTTGGAGTTGTTACAGGAAAGCATTTAGCAGAGCACTGCCGAGCTGAATACCCTCGCATTCCCAACTTAATCCTATGGGTTCTGGCTGAAATTTCAATAGTTGCATGTGACATTCCGGAGGTTATAGGAACAGCTTTTGCTTTGAACATGCTATTCAAAATTCCGGTTTGGTGTGGGGTTCTTCTCACTGGACTCAGTACATTGATGCTTCTAGCATTACAGCAATATGGGGTCAGGAAGCTCGAGTTCTTGATAGCATTTCTCGTCCTTACAATTGCTGTTTGCTTCTTTATCGAGCTTGGCTATGCCAAGCCAGTCGCTTCGGAAGTTCTCTATGGGCTTTTTGTCCCTCAGCTCAAAGGAAATGGCGCTACTGGTCTTGCCATTTCTCTTCTTGGTGCTATGGTTATGCCGCACAATCTCTTCCTTCACTCCGCATTGGTTCTGTCTCGAAAGATTCCACGATCTGTTCGTGGAATCAAGGAAGCTTGCCGATTTTACTTAATAGAGAGTGCCTTTGCTCTCACGATCGCCTTCCTTATAAATGTGTCGGTTATTTCCGTGAGTGGTGCAGTTTGCAATTCGCGAGATTTAAATGCAGAAGACGGGAAGAACTGCAAAGACTTGGACTTGAACTCGGCCTCATTTTTACTGAGAAATGTGTTGGGTAGTTGGAGCTCGAAGCTTTTCGCAGTTGCTTTGTTGGCATCTGGCCAAAGTTCTACCATTACAGGCACTTATGCAGGCCAGTATGTAATGCAGGGATTTCTCGATTTACGATTGAAGCCATGGCTCCGGAACTTTCTAACGCGATGTTTGGCAATAGTCCCTAGTTTGGTCGTTGCTGTCATTGGGGGCTCTGCCGGAGCTGGGAGGCTGATTATAATTGCATCGATGATTTTGTCGTTTGAACTACCCTTTGCTCTAGTTCCTCTTCTCAAATTCACTAGCAGCAAGGCCAAGATGGGGATGTATGCGAATTCGATCGGGATTTCAGCTCTTACCTGGATAGTCGGTTTCCTAATCATGGCCATCAACATATACTATCTAGTTTCAGGCTTTGTTGGTCTTCTTTTTCATAGAAATTTAGGTATTTTGGCTGTCGTCGTCCTCGGGATCATGGGATTTTCTGCCATCGGTCTGTATTTGGCCGGAATTGCTTATTTGGTTTTGCGAAAAAACAAAGGCAAAGCAGCTACTGATCTTCTATCCTTGACAATGCCAGAAAGTCAAGAAGCAGCCGACGAAGCCGGCAATGGTGCAATGCATTGTCTCCCCCGAGAAGACATCGTCTCCATGCAATTGCCTCAGAGAGGTAGCACGGCCGATGTGGACTGA 1641 45.46 MVVTGSTHGQQQFIASTGNRSVSNVPLIENSDADQIVVPDRKSWRNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALVIQSLAANLGVVTGKHLAEHCRAEYPRIPNLILWVLAEISIVACDIPEVIGTAFALNMLFKIPVWCGVLLTGLSTLMLLALQQYGVRKLEFLIAFLVLTIAVCFFIELGYAKPVASEVLYGLFVPQLKGNGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYLIESAFALTIAFLINVSVISVSGAVCNSRDLNAEDGKNCKDLDLNSASFLLRNVLGSWSSKLFAVALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLVVAVIGGSAGAGRLIIIASMILSFELPFALVPLLKFTSSKAKMGMYANSIGISALTWIVGFLIMAINIYYLVSGFVGLLFHRNLGILAVVVLGIMGFSAIGLYLAGIAYLVLRKNKGKAATDLLSLTMPESQEAADEAGNGAMHCLPREDIVSMQLPQRGSTADVD 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12862460 12865798 + Bpe002907.1 Bpe10g00595 109717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00595 546 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 11 546 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe10g00595 546 PRINTS Natural resistance-associated macrophage protein signature 179 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe10g00595 546 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe10g00595 546 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe10g00595 546 PRINTS Natural resistance-associated macrophage protein signature 399 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe10g00595 546 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe10g00595 546 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe10g00595 546 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe10g00595 546 Pfam Natural resistance-associated macrophage protein 67 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe10g00595 546 Hamap Divalent metal cation transporter MntH [mntH]. 31 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bpe10g00595 546 PANTHER METAL TRANSPORTER NRAMP1 11 546 - -
Bpe10g00595 546 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 45 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00634 Bpe-Chr2:4141432 Bpe10g00595 Bpe-Chr10:12862460 0 dispersed
Bpe10g00595 Bpe-Chr10:12862460 Bpe13g00112 Bpe-Chr13:7212742 1.80E-102 dispersed
Bpe10g00595 Bpe-Chr10:12862460 Bpe06g00677 Bpe-Chr6:17405797 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00595 K21398 - mnt:21396684 873.618