Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00596 ATGCCGGTCGACAGCTCTTCCGTTTCCGGGAAAACTGTATGTGTCTCCGGAGCCGGAGGTTTCATTGCTTCTTGGATCGTTAAACTGCTCCTTGAGAAGGGGTATAGTGTCAGAGGAACTGTGAGGAATCCAGATGATCCGAAAAATGCTCATTTGAAAGAGCTGGATGGAGCGAAGGAGAGGTTAACTTTGTGCAAGGCTGATCTTCTGGATTTCGAGAGCCTCAAAGCGGCCATTGATGGATGCGATGGAGTTTTTCATACTGCATCGCCTGTTACTGATGATCCTGAACAAATGGTGGAACCGGCCGTGGATGGGACGAGGAATATCATCGTCGCAGCTGCCGAGGCAAATGTTCGAAGAGTTGTCTTCACATCGTCGATCGGCGCCGTCTATATGGACCCTTACCGGAGCCCCGACGTCATTGTCGACGAGTCCTGCTGGAGTGACCTAGAATTCTGCAAAAACACTAAGAATTGGTACTGCTACGGTAAAGCAGTGGCGGAGCAGGCGGCTTGGGAGGAGGCGAAGAAGAGAGGGGTGGACTTGGTGGTGGTGAATCCAGTGCTGGTCTTAGGGCCATTGCTCCAACCCACCATTAATGCCAGCATAGTTCATGTTCTCAAGTACTTGACCGGCTCGGCCAAGACGTACGCTAACTCCGTCCAAGCTTACGTCCATGTCAGAGACGTTGCTCTCGCTCATATTCTGGTCTACGAGACGCCCTCCGCCGCCGGACGATATCTCTGCGCCGAGAGCGTTCTTCACCGCGGCGACGTTGTCGAAATTCTGGCTAAGTTCTTCCCTGAGTATCCCATTCCCACCAGGTGTTCGGACGAAGTAAACCCGAGGAAAAAACCGTACAAGTTCTCGAACCAGAAGCTGAGAGATTTGGGTTTGGAGTTTACATCGGCCAGACAATGTTTGTACGAAACCGTGAAGAGCCTCCAGGAGAAAGGTCATCTTCCGGAGCCCGCACAGCCGGAGGATGCACTTCGAATTCAATCTTAA 1011 52.03 MPVDSSSVSGKTVCVSGAGGFIASWIVKLLLEKGYSVRGTVRNPDDPKNAHLKELDGAKERLTLCKADLLDFESLKAAIDGCDGVFHTASPVTDDPEQMVEPAVDGTRNIIVAAAEANVRRVVFTSSIGAVYMDPYRSPDVIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEEAKKRGVDLVVVNPVLVLGPLLQPTINASIVHVLKYLTGSAKTYANSVQAYVHVRDVALAHILVYETPSAAGRYLCAESVLHRGDVVEILAKFFPEYPIPTRCSDEVNPRKKPYKFSNQKLRDLGLEFTSARQCLYETVKSLQEKGHLPEPAQPEDALRIQS 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12867041 12869450 - Bpe002908.1 Bpe10g00596 109718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00596 336 Gene3D - 3 335 - -
Bpe10g00596 336 CDD FR_SDR_e 13 300 - -
Bpe10g00596 336 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 7 326 - -
Bpe10g00596 336 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Bpe10g00596 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 317 IPR036291 -
Bpe10g00596 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00448 Bpe-Chr9:11853178 Bpe10g00596 Bpe-Chr10:12867041 0 dispersed
Bpe10g00534 Bpe-Chr10:12421322 Bpe10g00596 Bpe-Chr10:12867041 1.23E-74 dispersed
Bpe10g00596 Bpe-Chr10:12867041 Bpe11g00712 Bpe-Chr11:5492428 4.84E-91 dispersed
Bpe11g01543 Bpe-Chr11:11492625 Bpe10g00596 Bpe-Chr10:12867041 3.40E-34 dispersed
Bpe02g00291 Bpe-Chr2:1920389 Bpe10g00596 Bpe-Chr10:12867041 3.75E-87 transposed
Bpe08g00280 Bpe-Chr8:1662616 Bpe10g00596 Bpe-Chr10:12867041 2.62E-96 transposed
Bpe10g00596 Bpe-Chr10:12867041 Bpe06g00678 Bpe-Chr6:17409383 0 wgd
Bpe10g00596 Bpe-Chr10:12867041 Bpe09g00447 Bpe-Chr9:11844856 1.06E-37 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00596 K09753 - jre:109010062 587.415