Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00604 ATGGCTTCGTTCTTCTGCTGTGGAGCCGGTTCTACTGGTAAAAAACAAGGGAAGAAGCAGCAAACATGGAGGGTCTTTTCATTGAAGGAACTACATTCAGCCACCAACAATTTCAACTACGATAACAAGCTTGGAGAAGGAGGCTTTGGAAGTGTTTACTGGGGTCAGCTTTGGGATGGATCTCAAATTGCAGTCAAAAGGTTGAAGGTATGGAGCAACAAAGCAGAGCTAGAATTTTCCGTTGAAGTTGAGATATTGGCCAGAGTTCGCCACAAGAATCTACTTACTCTACGTGGCTACTGCGCTGAAGGTCAAGAGCGCTTGATTATTTATGATTACATGCCAAACTCGAGCCTTTTATCCCATCTTCACGGCGTTCACTCAACCGAGCACCTTCTAAATTGGAAACGCAGAATGGCCATTGTGGTTGGTTCTGCTGAGGGAATTGCCTATCTTCACCATCAAGCTGTCCCACATATAATTCACCGAGACATAAAAGCCAGTAATGTCTTACTGGATACAGATTTCCAAGCTCAGGTTGCTGATTTTGGATTTGCAAAGCTTATCCCCGACGGTGCGACTCATGTCACAACTCGTGTGAAGGGTACTCTCGGTTATCTTGCCCCCGAATATGCAATGTTAGGGAAAGCATCGGAGAGTTGTGATGTCTACAGCTTTGGAATTCTATTGCTTGAGCTTGCCACCGGAAAAAGACCCATTGAGAAACTCAGCCCAACGATGAAGCGCACTATTGCAGATTGGGCACTTCCTCTGGCTTGTGAGGGGAAGTTTGATGAGTTAGCAGATTCCAAACTCAGCGGAGAATACGTGCCGGACGAGATGAAAAGGGTAATCCTTGTTGCACTCATTTGTGCCAATCACCGGCCTGAAAAAAGACCCTCCATGCTCGAGGTTGTGCAGCTACTGAAGGGAGAATTGAAAGATGAGCTAAGTAGATTAGAAGACAATGAACTGTTTAAGAATGTTGAGGCTGCAAACGAAATTAAGGAGGCATCTATGGTGGAAGACTACTCAGATTTTATCTCGGAAGAAAAGGATTCAAAAGAGGAGACGGAAGAGTGGAAGAGCACGTCTTAG 1098 45.26 MASFFCCGAGSTGKKQGKKQQTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAELEFSVEVEILARVRHKNLLTLRGYCAEGQERLIIYDYMPNSSLLSHLHGVHSTEHLLNWKRRMAIVVGSAEGIAYLHHQAVPHIIHRDIKASNVLLDTDFQAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGKRPIEKLSPTMKRTIADWALPLACEGKFDELADSKLSGEYVPDEMKRVILVALICANHRPEKRPSMLEVVQLLKGELKDELSRLEDNELFKNVEAANEIKEASMVEDYSDFISEEKDSKEETEEWKSTS 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12925200 12927211 - Bpe002916.1 Bpe10g00604 109726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00604 365 Coils Coil 303 323 - -
Bpe10g00604 365 PANTHER OS01G0750732 PROTEIN 2 361 - -
Bpe10g00604 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Bpe10g00604 365 SMART serkin_6 38 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00604 365 CDD STKc_IRAK 44 311 - -
Bpe10g00604 365 Gene3D Phosphorylase Kinase; domain 1 10 113 - -
Bpe10g00604 365 PIRSF ILK 7 327 - -
Bpe10g00604 365 Pfam Protein kinase domain 39 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00604 365 PANTHER BNAA05G14800D PROTEIN 2 361 - -
Bpe10g00604 365 ProSitePatterns Protein kinases ATP-binding region signature. 44 66 IPR017441 GO:0005524
Bpe10g00604 365 ProSiteProfiles Protein kinase domain profile. 38 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00604 365 SUPERFAMILY Protein kinase-like (PK-like) 20 309 IPR011009 -
Bpe10g00604 365 Gene3D Transferase(Phosphotransferase) domain 1 114 327 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00601 Bpe10g00604 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00674 Bpe-Chr1:4778182 Bpe10g00604 Bpe-Chr10:12925200 6.25E-142 dispersed
Bpe10g00604 Bpe-Chr10:12925200 Bpe10g00918 Bpe-Chr10:14803184 1.76E-95 dispersed
Bpe07g00019 Bpe-Chr7:97283 Bpe10g00604 Bpe-Chr10:12925200 3.95E-77 transposed
Bpe10g00604 Bpe-Chr10:12925200 Bpe03g00601 Bpe-Chr3:26227540 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63538 PF00069 Pkinase 2.90E-44 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00604 - - fve:101293608 569.311