Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00609 ATGGCTGCTGATGTTATTTTCACCGTCAAGGACGATAATCCGATCGGGGCAAGTCTGATCGGAAGGGCATACATACCCGTTGAAGAGATTTTAGATGGGCAAGAAGTGGATAAATGGGTTGAAATCTTAGATGCTGACAAAAATCCCATCAGGGGAAACTCTAAGATTCATATTAAGCTTCAATATTTCGAGGTCACTAAGGATGGTTGTTGGAGTCGAGGAATTCGGAGCGCGAAATTTCCCGGAGTTCCTTATACATTCTACTCGCAGAGACAAGGGTGTAAGGTCTCTTTGTACCAAGATGCACATATCCCGAATGGTTTCATCCCGAAAATCCCGCTTGCCGGAGGGAAGTTCTTCGAGCCTCACCGGTGTTGGGAAGATGTTTTCGACGCTATAACCAATGCAAAGCACCTGATTTACATAACAGGTTGGTCTGTTTACACTGAAATTTCACTTATAAGGGACTCGAGGAGGCCTAAAGCCGGCGGAGATATCCTACTCGGTGAGCTGCTTAAGAAAAAAGCAAGTGAAGGTGTTAGAGTTCTTATGCTTGTTTGGGATGATAGAACGTCTGTTGGTGTGTTGAAAAAAGATGGTCTGATGGCCACTCATGACCAAGAAACAGAACAATTCTTCAAAAACAGCGATGTGCATTGCGTCCTCTGCCCTCGAAATCCCGACGACGGGGGAAGCATAGTTCAAGATTTACAAATCTCGACTATGTTCACTCATCATCAGAAGATCGTTGTGGTCGATAGCGGGATGCCAATCAAAGGATTGGAAAAACGGCGAATCGTGAGTTTTGTGGGCGGTATTGATCTTTGTGATGGAAGATATGATACTCCTTTCCATTCGCTTTTCAGGACGTTGGATACTGCCCATCATGATGATTTTCATCAACCGAACTTTGCCGGTGCTACGATTGCAAAAGGCGGACCTAGAGAGCCTTGGCACGACATTCATTCTCGACTCGAAGGACCAATTGCATGGGATGTTTTGTTTAATTTTGAGCAAAGATGGAGAAAGCAAGGAGGGAAAGATATCCTTCTTCAACTGAGGGAGCTCGAAGAAGTAATCATCCCGCCTTCTCCGGTTATGTTCCCGGATGATCGCGAAACATGGAATGTTCAGTTATTTCGGTCTATCGATGGGGGGGCTGCTTTTGGCTTTCCGGAGGCGCCTGAAGATGCTGCCAGAGCAGGCCTTGTCAGTGGGAAAGACAACATCATCGATAGAAGCATTCAGGATGCTTACATCAACGCTATTCGACGGGCAAAAGATTTTATCTACATCGAAAATCAGTATTTCCTCGGAAGCTGTTTCGATTGGAGCCCTGATGGTATTAAGCCGGAAGATATCGGAGCTCTGCATTTGATTCCAAAGGAGCTCTCTCTGAAGATAGTAAGTAAGATTGAAGCAGGAGAGAGATTTACTGTCTATGTTGTTGTTCCTATGTGGCCGGAGGGAATGCCGGAGAGTGGATCAGTTCAGGCTATTTTAGATTGGCAGAAGAGGACGATGGAGATGATGTATAAAGATATCATTCAGGCTCTAAACGCCAAGGGCATCGAGGACGACCCTCGAAACTATTTGACGTTTTTCTGCCTCGGAAACCGAGAACTCAAGAAGTCCGGCGAGTATGAGCCGTCGGAAAAACCGGAGGAAGATACAGATTATATGAGAGCCCAGCAGGCTAGGCGCTTCATGATCTATGTTCATGCCAAGATGATGATTGGTAAGTGGCATAAACCTATCTCTGTGAATCCTCGGATCTGTTTAACAAGTCTAATGGCTTTGTCCCTTTTTGCAGTGGACGACGAATACATAATCATCGGCTCGGCCAACATCAACCAGAGATCGATGGACGGAGCAAGAGACTCTGAGATAGCCATGGGAGCCTACCAGCCTTACCATCTGTCGACCCACGTCCCAGCCCGTGGTCAAGTCCATGGCTTTCGCATGGCTCTATGGTACGAACACCTCGGCATGCTTGACGATTGCTTTCTTCAGCCAGAGAGCGAGGAATGTGTTCGAAAGGTGAACCTGATTGCTGACAAATACTGGGACCTCTACTCAAACGAAACCCTCGAGCATGACTTGCCCGGTCACTTGCTTCGCTATCCGGTTGGAATTGCGAGCGAAGGTGCAGTCACGGAGCTGCCGGGGTTCGAGCATTTTCCGGACACAAAAGCTCGTGTGCTCGGAACCAAATCTGACTACCTCCCTCCCATTCTGACCACTTACAGTGGTTGTTTTGGAAAGCCAAAACTGAAAACTTCGCTGGATGAATCATCTAAAATATTATCGATTCAAAGCCGGAGAGTAAAGAAATCTTGTAAATCGGAGGATTTTTGGACGACAAGCACATGTGATATGGACAACAGTGCTGGTCAGTCACAGGCAAGCATGTCTTCAATTAGCACAACCAACCATATGCTTGATCCTCATGGTTCCTCCTCCATTTCCAACGCCCCTTTTGAATACATAAATCATGGCAATTGTTCTATGTGGGCTTGGGTTGTAGGTCTTCTTCTCTGGAACCAAACCCGGCTACGATGGCTGGGAAATAAAAGTAAACTAATCTCCGAGAATCGAGCACAGCTAATTCGTGAACCCAAATTGAACTGGAATGCAACGTACGAAAGTTTACTAGGAACGAATAAACCTCTCCCTCAGCCGATTCCGCTGAGCGACATGGTAGATTTTCTGGTGGATATATGGGAGCAAGAGGGATTGTATGATTGA 2748 46.36 MAADVIFTVKDDNPIGASLIGRAYIPVEEILDGQEVDKWVEILDADKNPIRGNSKIHIKLQYFEVTKDGCWSRGIRSAKFPGVPYTFYSQRQGCKVSLYQDAHIPNGFIPKIPLAGGKFFEPHRCWEDVFDAITNAKHLIYITGWSVYTEISLIRDSRRPKAGGDILLGELLKKKASEGVRVLMLVWDDRTSVGVLKKDGLMATHDQETEQFFKNSDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSGMPIKGLEKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFAGATIAKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDILLQLRELEEVIIPPSPVMFPDDRETWNVQLFRSIDGGAAFGFPEAPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKDFIYIENQYFLGSCFDWSPDGIKPEDIGALHLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGMPESGSVQAILDWQKRTMEMMYKDIIQALNAKGIEDDPRNYLTFFCLGNRELKKSGEYEPSEKPEEDTDYMRAQQARRFMIYVHAKMMIGKWHKPISVNPRICLTSLMALSLFAVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLSTHVPARGQVHGFRMALWYEHLGMLDDCFLQPESEECVRKVNLIADKYWDLYSNETLEHDLPGHLLRYPVGIASEGAVTELPGFEHFPDTKARVLGTKSDYLPPILTTYSGCFGKPKLKTSLDESSKILSIQSRRVKKSCKSEDFWTTSTCDMDNSAGQSQASMSSISTTNHMLDPHGSSSISNAPFEYINHGNCSMWAWVVGLLLWNQTRLRWLGNKSKLISENRAQLIREPKLNWNATYESLLGTNKPLPQPIPLSDMVDFLVDIWEQEGLYD 915
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12949089 12954889 - Bpe002921.1 Bpe10g00609 109731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00609 915 SUPERFAMILY Phospholipase D/nuclease 367 579 - -
Bpe10g00609 915 Pfam Protein of unknown function (DUF4050) 873 915 IPR025124 -
Bpe10g00609 915 CDD PLDc_pPLDalpha_2 407 641 - -
Bpe10g00609 915 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 241 279 IPR001736 GO:0003824
Bpe10g00609 915 Gene3D C2 domain 1 70 IPR035892 -
Bpe10g00609 915 SMART pld_4 241 279 IPR001736 GO:0003824
Bpe10g00609 915 SMART pld_4 594 621 IPR001736 GO:0003824
Bpe10g00609 915 Gene3D Endonuclease Chain A 118 358 - -
Bpe10g00609 915 PIRSF PLD_plant 1 581 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bpe10g00609 915 PIRSF PLD_plant 599 748 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bpe10g00609 915 Pfam Phospholipase D Active site motif 241 279 IPR001736 GO:0003824
Bpe10g00609 915 SUPERFAMILY Phospholipase D/nuclease 603 678 - -
Bpe10g00609 915 PANTHER PHOSPHOLIPASE D 602 748 IPR015679 -
Bpe10g00609 915 PANTHER PHOSPHOLIPASE D 1 580 IPR015679 -
Bpe10g00609 915 Pfam Phospholipase D C terminal 666 738 IPR024632 -
Bpe10g00609 915 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 602 621 IPR001736 GO:0003824
Bpe10g00609 915 Gene3D Endonuclease Chain A 391 579 - -
Bpe10g00609 915 PANTHER PHOSPHOLIPASE D ALPHA 1 602 748 - -
Bpe10g00609 915 PANTHER PHOSPHOLIPASE D ALPHA 1 1 580 - -
Bpe10g00609 915 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 64 IPR035892 -
Bpe10g00609 915 SUPERFAMILY Phospholipase D/nuclease 71 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00699 Bpe-Chr6:17567797 Bpe10g00609 Bpe-Chr10:12949089 0 dispersed
Bpe10g00609 Bpe-Chr10:12949089 Bpe10g00689 Bpe-Chr10:13372273 6.01E-179 dispersed
Bpe13g01055 Bpe-Chr13:16195419 Bpe10g00609 Bpe-Chr10:12949089 3.26E-29 dispersed
Bpe15g01051 Bpe-Chr15:19828878 Bpe10g00609 Bpe-Chr10:12949089 8.40E-19 dispersed
Bpe08g00570 Bpe-Chr8:3995518 Bpe10g00609 Bpe-Chr10:12949089 0 transposed
Bpe10g00609 Bpe-Chr10:12949089 Bpe02g01247 Bpe-Chr2:16001717 0 wgd
Bpe10g00609 Bpe-Chr10:12949089 Bpe06g00697 Bpe-Chr6:17563633 1.81E-84 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00609 K01115 - jre:109013902 1330.47