Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00643 ATGATAATGAAGCAAAATCGATTTTCCTCGGAGAAAATCAAAAGAAGACAGAAACGGTTATTTTCTATAAGAAGGAAAGTGGACGAAGAAATAGAGAGAGGCGGAGACATTTTGAGTCCTCGGTTGACACTGGACGTTGATGGTATACTCACACTCATCAAAGCGGAGAAAAGGAGACTGAAAATGTTACTACAAGAGATCGGGGTTGATGCTCTGCGCTTCTCCACCAAACCCAATAAAGAAAAGAAGACGCAACGAGAGCTGCGCATATTCAGTTTCCAAACCATTGTTCATGCCACAAAAAATTTCTCTGATGAAAACAAGTTGGGAAAAGGAGGGTATGGCCCAGTTTATAAGGGAAGGTTACCAAATGGGCAGGAAATTGCCGTAAAAAGACTTTCGAGCAGTTCAGGACAAGGATTTGTGGAGTTCAAGAATGAAGCCCTACTCGTCTCTCAGCTCCAACACACTAATCTGGTGAGGCTTTTAGGGTTCTGCGTTCAAAAACGAGAGAGAGCCTTGGTATACGAGTTCATGCCCAATAAAAGCTTAGATTTCTTCATCTTCGATTCTACTAGAAAGAAGATACTGGACTGGAAGAAACGCTTCATAATCATTGAGGGCATTGCACAAGGACTGGTTTACCTCCACAAGTATTCGAGATTGAAAGTCATTCACAGAGATTTGAAAGCCAGCAACGTTCTACTCGATTTAGAAATGAATCCCAAAATATCAGATTTTGGAATGGCCAGACTGCTGGGTCATGGAGACTCAGAAGAAAATACAAACAGAATTGTCGGCACATTTGGGTATATGCCTCCAAAATACGCTCTGCAGGGAACTGTGTCCATAAAAACTGACGTGTTTAGTTTTGGAATTCTGTTGCTCGAGATTGTGAGCGGGAGGAAGAATAACAGTCGCTACCATCCAGATCACCCCCTAAATCTGACAGGATATGCTTGGACTTTGTGGAAGGAGGGCAAAGGGGTGGAGCTGATCGACCCTTCACTGGATGAATCAGTTTCTCGTGATGAAGTTATGAAATGCATACAAGTCGGTCTGCTCTGCGTTCAAGGTCAAGCGAGTAGCAGACCCACCATGATTGACGTTGTTTTTATGCTCTCAACTGAAAGCGCCCGACTACCAATACCGAGAAAGCCTGCGTTCTTCATCAGTAGCATTGCCGAAACGCCGGAGGAAGCCGAGACGCGAGTTGAAATCTTTTCAATAAATGAAATGACCATGTCAAATATGGAGTGGGTATATGCCTTCGGAATGCGTTCTGCAGGGTACTACTGTGTCCATGAAAACTCATGTAGCAGTTCAAGCATGTTCGAAGATATGGAGGTGAGGTGA 1356 43.73 MIMKQNRFSSEKIKRRQKRLFSIRRKVDEEIERGGDILSPRLTLDVDGILTLIKAEKRRLKMLLQEIGVDALRFSTKPNKEKKTQRELRIFSFQTIVHATKNFSDENKLGKGGYGPVYKGRLPNGQEIAVKRLSSSSGQGFVEFKNEALLVSQLQHTNLVRLLGFCVQKRERALVYEFMPNKSLDFFIFDSTRKKILDWKKRFIIIEGIAQGLVYLHKYSRLKVIHRDLKASNVLLDLEMNPKISDFGMARLLGHGDSEENTNRIVGTFGYMPPKYALQGTVSIKTDVFSFGILLLEIVSGRKNNSRYHPDHPLNLTGYAWTLWKEGKGVELIDPSLDESVSRDEVMKCIQVGLLCVQGQASSRPTMIDVVFMLSTESARLPIPRKPAFFISSIAETPEEAETRVEIFSINEMTMSNMEWVYAFGMRSAGYYCVHENSCSSSSMFEDMEVR 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13135630 13143369 + Bpe024700 Bpe10g00643 109765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00643 451 SMART serkin_6 103 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00643 451 PANTHER OS01G0783800 PROTEIN 70 393 - -
Bpe10g00643 451 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 70 393 - -
Bpe10g00643 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Bpe10g00643 451 Gene3D Transferase(Phosphotransferase) domain 1 179 381 - -
Bpe10g00643 451 Gene3D Phosphorylase Kinase; domain 1 77 178 - -
Bpe10g00643 451 ProSiteProfiles Protein kinase domain profile. 103 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00643 451 SUPERFAMILY Protein kinase-like (PK-like) 86 402 IPR011009 -
Bpe10g00643 451 CDD STKc_IRAK 109 374 - -
Bpe10g00643 451 Pfam Protein tyrosine and serine/threonine kinase 106 308 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00643 Bpe-Chr10:13135630 Bpe11g01168 Bpe-Chr11:8659570 3.84E-128 dispersed
Bpe10g00643 Bpe-Chr10:13135630 Bpe08g00331 Bpe-Chr8:1970054 2.15E-134 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63540 PF07714 PK_Tyr_Ser-Thr 8.50E-41 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00643 - - qsu:112032008 489.96