Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00665 ATATTGCCGATGGCGATGTTCTGCAAGGAAGGTCAAAAAATAGGACTGGATAATGGTAAATATGTGAGGTACACACCTGAGCAGGTCGAAGCCCTTGAGAGGCTCTATCATGACTGTCCCAAACCCAGTTCGATTCGTCGCCAGCAGCTCATCAGAGAGTGCCCCATTCTCTCCAACATTGAGCCTAAGCAAATCAAAGTCTGGTTTCAAAACCGACGATGCAGAGAGAAGCAGAGGAAAGAAGCGTCAAGACTTCAAGCTGTCAATCGGAAGCTTACGGCAATGAATAAGCTCCTAATGGAGGAGAATGATCGGTTGCAGAAGCAGGTTTCGCAGCTGGTATATGAAAACGGATACTTCCGTCAGCACACCCAGAGTGCGACGCTTGGTAACAAAGACACTGGTGAAGCTGTGATGACTGGCGGTCAGCACAATTTGACAACTCAGCATCCGCCAAGAGATGCTAGTCCTGCAGGGCTGTTGTCCATTGCAGAAGAAACTTTAACAGAGTTTCTTTCAAAGGCCACTGGAACTGCTGTAGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTAGCTATTTCTCATGGTTGTGCTGGAGTGGCAGCCCGAGCCTGCGGTCTGGTCGGCCTGGAGCCTACTAGGGTTGCAGAAATCCTTAAGGATCGTCCATCATGGTTTCGCGATTGTCGAGCTGTGGATGTACTTAATGTGCTGCCAACTGCAAATGGTGGAACTATTGAGTTGCTTTATATGCAGATGTATGCCCCAACAACATTGGCACCAGCTCGTGATTTCTGGTTGCTTCGCTACACTTCTGTTTTAGAAGATGGCAGCCTTGTGATCTGTGAAAGATCACTTAAGAACACTCAGAATGGTCCAACTATGCCTTCAGTGCAGCATTTTGTTAGAGCGGAGATGCTCCCAAGTGGGTACCTGATTCGACCATGTGAAGGAGGCGGCTCAATTATACACATTGTGGATCATATAGATTTGGAGCCTTGGAGTGTACCAGAAGTGTTGCGACCATTGTATGAATCATCTACTATTCTTGCCCAAAAGACAACAATGGCGGCTCTGCGCCAATTGAGGCAGATTGCCCATGAGGTTTCCCAATCTAATGTAACAGGCTGGGGTAGACGACCCGCAGCCCTTCGTGCTCTTAGTCAGAGATTGACAAGGGGTTTTAATGAGGCACTTAATGGGTTTACTGATGAGGGATGGTCGGTGATCGGAAGTGATGGCATGGATGATGTTACTATCCTTGTGAACTCATCTCCTGACAAACTAATGGGTTTGAATCTTTCATTTGGAAATGGATTTTCTGCTGTGAGCAACGCTGTCTTATGTGCCAAAGCATCAATGTTATTGCAGAATGTACCTCCTGCAATCCTTCTTCGGTTTCTACGGGAGCACCGGTCAGAATGGGCAGACATCAATATGGATGCTTATTCGGCTGCAGCTATCAAGGTTGGTCCATGTAGTTTACCAGGGACTCGAGTTGGAAGTTTTAGAAGTCAAGTTATACTTCCATTGGCTCACACTATTGAACATGAAGAGTGCATGGAAGTCATTAAGCTTGAAGGTGTTGGCCATTCTCCTGAGGAGGCGATGTTGCCCAGAGAAATGTTTCTCTTGCAACTCTGCAGTGGAATGGATGAAAGTGCTGTTGGCACGTGTGCAGAACTAATATTCGCTCCAATTGATGCATCTTTCGCTGATGATGCACCTCTTTTACCATCAGGATTTCGCATTATACCTCTTGATTCAGGGAAGGAAGCAGCTAGTCCGAATCGCACTCTTGACCTTGCTTCTGCTCTCGAAATTGGGGCTGCTGGAAACAGAGCACTGAATGATTGTTCCGTGAATTCTGGGTGTACAAGGTCTGTGATGACGATAGCGTTTGAATTTGCCTTTGAGAACCACATGCAAGAACACGTAGCCTCAATGGCTCGACAATATGTAAGGAACATCATATCATCGGTTCAGAGGGTAGCATTAGCACTTTCTCCTCATTTGAACTCATCAGCCGGACTCCGTCCTCCACTCGGGACTCCCGAAGCACAGACCCTTGCTAAATGGATCTGCAATAGCTACAGGGCCTACTTGGGGGTTGATTTGCTGAAATCTGGAAATGAAGGGAGCGAATATATTCTCAAAGCGTTATGGCATCATTCGGATGCAATCATGTGCTGCTCCCTTAAGGCATTGCCAGTTTTTACTTTCGCAAACCAGGCGGGGCTAGACATGCTTGAAACCACCTTAGTTGCGTTACAAGACATAACTTTAGAGAAGATATTCGATGATCACGGAAGGAAGTCTCTCTGCTCCGAGTTTCCGCAGATAATGCAGCAGGGATTCACGTGCCTTCAAGGCGGTATATGCCTGTCAAGCATGGGCCGACCGATCTCCTACGAACGGTCAGTTGCTTGGAAAGTGGTGAACGAAGAAGAGACTGCTCACTGCATCTGCTTCATGTTTGTGAACTGGTCGTTTGTCTAA 2520 47.18 ILPMAMFCKEGQKIGLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSATLGNKDTGEAVMTGGQHNLTTQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCAGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANGGTIELLYMQMYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPTMPSVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHIDLEPWSVPEVLRPLYESSTILAQKTTMAALRQLRQIAHEVSQSNVTGWGRRPAALRALSQRLTRGFNEALNGFTDEGWSVIGSDGMDDVTILVNSSPDKLMGLNLSFGNGFSAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADINMDAYSAAAIKVGPCSLPGTRVGSFRSQVILPLAHTIEHEECMEVIKLEGVGHSPEEAMLPREMFLLQLCSGMDESAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEAASPNRTLDLASALEIGAAGNRALNDCSVNSGCTRSVMTIAFEFAFENHMQEHVASMARQYVRNIISSVQRVALALSPHLNSSAGLRPPLGTPEAQTLAKWICNSYRAYLGVDLLKSGNEGSEYILKALWHHSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKSLCSEFPQIMQQGFTCLQGGICLSSMGRPISYERSVAWKVVNEEETAHCICFMFVNWSFV 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13226686 13231928 + Bpe002976.1 Bpe10g00665 109787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00665 839 ProSiteProfiles START domain profile. 153 368 IPR002913 GO:0008289
Bpe10g00665 839 Coils Coil 75 116 - -
Bpe10g00665 839 SUPERFAMILY Homeodomain-like 19 83 IPR009057 -
Bpe10g00665 839 Pfam START domain 163 371 IPR002913 GO:0008289
Bpe10g00665 839 SMART START_1 162 372 IPR002913 GO:0008289
Bpe10g00665 839 SUPERFAMILY Bet v1-like 162 373 - -
Bpe10g00665 839 CDD homeodomain 20 80 IPR001356 GO:0003677
Bpe10g00665 839 Pfam MEKHLA domain 696 838 IPR013978 -
Bpe10g00665 839 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 4 839 IPR044830 GO:0003700
Bpe10g00665 839 SMART HOX_1 17 83 IPR001356 GO:0003677
Bpe10g00665 839 ProSiteProfiles 'Homeobox' domain profile. 15 79 IPR001356 GO:0003677
Bpe10g00665 839 PANTHER CLASS III HD-ZIP PROTEIN CNA1 4 839 - -
Bpe10g00665 839 CDD bZIP 72 111 - -
Bpe10g00665 839 Gene3D - 198 381 IPR023393 -
Bpe10g00665 839 Gene3D - 15 86 - -
Bpe10g00665 839 CDD START_ArGLABRA2_like 157 373 - -
Bpe10g00665 839 Pfam Homeodomain 20 78 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00166 Bpe-Chr2:1147422 Bpe10g00665 Bpe-Chr10:13226686 0 dispersed
Bpe08g00442 Bpe-Chr8:2791068 Bpe10g00665 Bpe-Chr10:13226686 0 dispersed
Bpe08g01320 Bpe-Chr8:14447614 Bpe10g00665 Bpe-Chr10:13226686 0 dispersed
Bpe10g00665 Bpe-Chr10:13226686 Bpe11g00813 Bpe-Chr11:6065519 0 dispersed
Bpe10g00665 Bpe-Chr10:13226686 Bpe04g00400 Bpe-Chr4:2516029 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21961 PF01852 START 6.10E-55 CL0209 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00665 K09338 - csv:101213106 1553.5