Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00673 TTGGAAATGGATGGAGGTCCTGAGAAACGGGGAGATTACCCTCTCTTACTGGATTTGATACCCAGGAAGAGAGACTGGCTAGTGAGCATGGATGAACAGAAGATCCATGGCTGCTTAGAGGAGAAAAAGCTGGAGCTTAGGCTTGGTTTACCCGATCAGGGCTTGAGTAATCGTAAAGATTCGACTGGAAAAATCAGAGAAAGAGACGAATCTCTTCTCTCTCTAGGCTACGTCTCCATGCCTTCTCCGCCAGCTGCCCAGAAACCATTTTCTTTCTCTGTGAAACCAGTTGAAACTGTTTCGTGGACCTCCCCTTTCCGTCTCTTCCCATCTACAGCTCATAGTTTGCTTGTCAAGAGCAAGGAAGTTGATTTTCAGAACGCAGAAACGCAAGCGTTTTTACCATCTTCTTCTGGTTTAGCTTCGCTCAACAACTCGCAGAAAAGAAGCGCTCCTGCTCCGGTTGTGGGTTGGCCGCCGGTTCGCTCTTTCAGAAAGAACCTGACAAACACGACCTCCTCTAACTCCAAGCCTTCTTCAGACTTAAACGGCGGCGTTCCAAGCAAGGTTTTTCCCGGCGAAAATCCGACCAAAGCTTGCAGAAAAGGTCATTTTGTGAAGATCAATATGGAAGGAGTCCCAATCGGAAGGAAAGTAGATCTCAGCGTCAACGACAGCTACGAAAAACTTTCTTCCGCCGTCATCGAACTCTTCAGGAGCCTACCTCAGGGAGATCAGGAGGATGCTGGATCGGCCGACCCAGAACGAAACTGGGGACTCATGGACAGAAGCGGAGAATATACTCTGATTTATGAGGATAACGAAGGAGACCGAATGCTTGCCGGCAGTGTCCCATGGCACATCTTTGCTTCAACGGTGAAGAGACTGCGGGTTTTGAAAAGCTCAGAAATTTCCGCTCTAACTCGTGAGTTCAATCGTTGA 942 48.41 LEMDGGPEKRGDYPLLLDLIPRKRDWLVSMDEQKIHGCLEEKKLELRLGLPDQGLSNRKDSTGKIRERDESLLSLGYVSMPSPPAAQKPFSFSVKPVETVSWTSPFRLFPSTAHSLLVKSKEVDFQNAETQAFLPSSSGLASLNNSQKRSAPAPVVGWPPVRSFRKNLTNTTSSNSKPSSDLNGGVPSKVFPGENPTKACRKGHFVKINMEGVPIGRKVDLSVNDSYEKLSSAVIELFRSLPQGDQEDAGSADPERNWGLMDRSGEYTLIYEDNEGDRMLAGSVPWHIFASTVKRLRVLKSSEISALTREFNR 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13267331 13268586 + Bpe002983.1 Bpe10g00673 109795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00673 313 MobiDBLite consensus disorder prediction 137 194 - -
Bpe10g00673 313 ProSiteProfiles PB1 domain profile. 203 301 IPR000270 GO:0005515
Bpe10g00673 313 PANTHER AUXIN-RESPONSIVE PROTEIN IAA26 13 311 - -
Bpe10g00673 313 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 13 311 IPR003311 GO:0005634|GO:0006355
Bpe10g00673 313 MobiDBLite consensus disorder prediction 137 151 - -
Bpe10g00673 313 SUPERFAMILY CAD & PB1 domains 201 298 - -
Bpe10g00673 313 Gene3D - 198 312 - -
Bpe10g00673 313 MobiDBLite consensus disorder prediction 164 183 - -
Bpe10g00673 313 Pfam AUX/IAA family 44 308 IPR033389 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe09g00415 Bpe10g00673 CCT
Bpe09g00415 Bpe10g00673 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00673 Bpe-Chr10:13267331 Bpe14g01286 Bpe-Chr14:9743782 2.72E-30 dispersed
Bpe10g00673 Bpe-Chr10:13267331 Bpe09g00006 Bpe-Chr9:62209 2.12E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21963 PF02309 AUX_IAA 5.90E-59 CL0072 Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00673 K14484 - qsu:111988286 270.781