Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe10g00678 | ATGGAAAAGCTTCCAAAATCAACAAGTATCAACTTCCAACAGCAAACAGCTTCATCAGTATCTTCTTCCATTGAAGAACCAGATCAAGAAGCCATTGCACAAATGAAGGAGATGATTTATAGAGCAGCAGCTTTTAGGCCAGTGAACTTGGGTTTAGAGGCAGTGGAGAAGCCGAAGAGGAAGAACGTTAGAATTTCAACTGATCCACAAACTGTAGCAGCGAGACAAAGGAGGGAGAGAATAGGAGAGAGAATTAGGGTTTTGCAGAAATTGGTTCCTGGTGGGAGCAAGATGGACACTGCATCCATGCTAGAGGAGGCTGCAAATTACCTCAAATTCCTCAAATCACAGATCAAGGCTCTTGAAAATCTTGGGCAAGAGATTGACACTATGAATAAGTCTCCACCTTCAAGCATTGCTTTCTCGTTCAACCCATCTTTTCCCATGCAAACCCACTTTTCAATCCTAAACCCTAATCACATCCCCTCTTTTCAGAAATGA | 501 | 42.51 | MEKLPKSTSINFQQQTASSVSSSIEEPDQEAIAQMKEMIYRAAAFRPVNLGLEAVEKPKRKNVRISTDPQTVAARQRRERIGERIRVLQKLVPGGSKMDTASMLEEAANYLKFLKSQIKALENLGQEIDTMNKSPPSSIAFSFNPSFPMQTHFSILNPNHIPSFQK | 166 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 13312033 | 13312533 | - | Bpe002989.1 | Bpe10g00678 | 109800 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe10g00678 | 166 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 70 | 129 | IPR036638 | GO:0046983 | |
| Bpe10g00678 | 166 | Coils | Coil | 104 | 124 | - | - | |
| Bpe10g00678 | 166 | Pfam | Helix-loop-helix DNA-binding domain | 75 | 114 | IPR011598 | GO:0046983 | |
| Bpe10g00678 | 166 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 65 | 114 | IPR011598 | GO:0046983 | |
| Bpe10g00678 | 166 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Bpe10g00678 | 166 | Gene3D | - | 69 | 135 | IPR036638 | GO:0046983 | |
| Bpe10g00678 | 166 | PANTHER | TRANSCRIPTION FACTOR BHLH87 | 3 | 160 | - | - | |
| Bpe10g00678 | 166 | SMART | finulus | 71 | 120 | IPR011598 | GO:0046983 | |
| Bpe10g00678 | 166 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 3 | 160 | IPR045843 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe10g00254 | Bpe-Chr10:9555078 | Bpe10g00678 | Bpe-Chr10:13312033 | 4.01E-31 | dispersed | |
| Bpe10g00678 | Bpe-Chr10:13312033 | Bpe02g01776 | Bpe-Chr2:20088959 | 5.03E-20 | dispersed | |
| Bpe10g00678 | Bpe-Chr10:13312033 | Bpe03g00644 | Bpe-Chr3:26654708 | 3.06E-69 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 21964 | PF00010 | HLH | 2.40E-06 | No_clan | Bpe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe10g00678 | - | - | qsu:112039421 | 249.21 |