Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00693 ATGGAGCGTCATACGTCGAATCACGAGGGGGAACCGGGCTACGATCGCCAACCATCAAGCCAACGCCTTTACAACCCCTACAAGGACCTACAACTTCCTTACCGTAATTTTCAGCTTTCTACTTCGCCGGAGTTTTTATTCGCCGAGGAGGCTAGCCGCCAGCGCCGATCTTGGAGTGAGAATCTAACCTTCTATACCGGCTGCGGCTACCTTGCGGGCGCTGTCGCCGGCGCCTCCAATGGCTTCGTGACCGGCGTCAAATCCTTTGAATCCGGAGATACGACGAAGCTTCGAGTCAACCGAATCTTGAACGCTTCTGGTCATTCCGGCAGAGTTTGGGGGAACAGGATTGGTGTGATCGGGCTGCTCTATGCAGGTATTGAGAGCGGGATAGTGGCTATGAGGGATACCGACGATGTTTGGAATAGCGTTGCGGCAGGACTAGGCACTGGTGCGTGTTATCGCGCGGCTAGAGGGGTACGATCAGCGGCTGTTGCAGGTGCAGTGGGAGGCGTATTGGTCGGGATGGCGGTGACAGCTAAGCAAGCATTGAAACGTCCCTTGAGAGTAATTAGGAGGTTTTTCTTGTTTCTTTTGACCTTTATTCTTGGTAATGAGAAGTGGGCAAAAGTCATGGCAGGTTTAGCTCCAGAAGGATCCCAGTTTGATGCCAATCAATATGATTTCAAAATGAGTGAGATACAATCTGAAGGACAGGATTTCTTCACCTCTTATGAAGAAGTTTATGAAAGCTTTGATTCTATGGGTTTACAAGAAAACTTGCTGAGGGGCATTTATGCCTATGGTTTTGAGAAGCCCTCTGCAATCCAGCAAAGGGGAATTGTTCCTTTCTGCAAAGGTCTTGATGTGATTCAACAGGCTCAATCTGGAACTGGAAAAACTGCAACATTTTGCTCTGGAATTTTGCAGCAACTCGATTATGGTTTGGTCCAGTGCCAGGCACTGGTTCTAGCACCCACAAGGGAACTGGCTCAACAGATTGAGAAGGTCATGCGAGCTCTAGGTGATTATCTTGGTGTCAAGGTTCATGCTTGTGTTGGAGGGACCAGTGTCCGTGAGGATCAACGCATTCTTCAAGCCGGGGTGCATGTTGTTGTTGGCACTCCTGGTCGAGTATTTGACATGTTGCAAAGACAGTCTCTCCGCCCAGACTACATTAAGATGTTTGTTTTGGATGAGGCTGATGAGATGCTTTCGCGTGGATTCAAGGATCAGATTTACGACATTTTCCAGCTTTTGCCATCAGAAGTTCAGGTTGGAGTTTTCTCAGCAACAATGCCACCCGAAGCTCTGGAAATCACAAGGAAGTTTATGAAGAAGCCTGTAAGAATCTTGGTGAAGCGTGATGAACTTACTTTGGAAGGTATCAAGCAGTTCTATGTTGATGTTGACAAGGAAGATTGGAAACTTGACACACTATGTGATCTTTACGAGACTCTGGCCATCACCCAGAGCGTTATCTTTGTCAACACGCGACGCAAGGTGGATTGGCTGACAGACAAGATGCGCAGTCGGGATCACACAGTATCAGCCACCCATGGAGACATGGACCAGAACACCAGAGATATAATTATGCGAGAATTCCGCTCTGGGTCTTCTCGTGTTCTCATAACAACCGATCTCCTAGCTCGTGGTATTGATGTCCAGCAAGTTTCGCTCGTTATAAACTATGATCTGCCGACACAACCAGAAAATTACCTTCATCGAATTGGTCGAAGTGGACGATTTGGAAGAAAGGGGGTTGCCATCAACTTTGTGACAAGCGATGCTGGTAGAATGTTATCCGACATTCAGAAGTTCTACAACGTGGTAATTGAGGAGCTGCCTGCTAACGTTGCTGATCTCCTGTGA 1872 47.92 MERHTSNHEGEPGYDRQPSSQRLYNPYKDLQLPYRNFQLSTSPEFLFAEEASRQRRSWSENLTFYTGCGYLAGAVAGASNGFVTGVKSFESGDTTKLRVNRILNASGHSGRVWGNRIGVIGLLYAGIESGIVAMRDTDDVWNSVAAGLGTGACYRAARGVRSAAVAGAVGGVLVGMAVTAKQALKRPLRVIRRFFLFLLTFILGNEKWAKVMAGLAPEGSQFDANQYDFKMSEIQSEGQDFFTSYEEVYESFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLQRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSEVQVGVFSATMPPEALEITRKFMKKPVRILVKRDELTLEGIKQFYVDVDKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDAGRMLSDIQKFYNVVIEELPANVADLL 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13402013 13407293 - Bpe003003.1 Bpe10g00693 109815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00693 623 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 462 623 IPR001650 -
Bpe10g00693 623 PANTHER RNA HELICASE 233 623 - -
Bpe10g00693 623 Pfam DEAD/DEAH box helicase 275 436 IPR011545 GO:0003676|GO:0005524
Bpe10g00693 623 Pfam Tim17/Tim22/Tim23/Pmp24 family 64 173 - -
Bpe10g00693 623 Pfam Helicase conserved C-terminal domain 476 584 IPR001650 -
Bpe10g00693 623 Gene3D - 240 458 IPR027417 -
Bpe10g00693 623 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 250 278 IPR014014 GO:0003724
Bpe10g00693 623 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 397 405 IPR000629 -
Bpe10g00693 623 CDD DEADc_EIF4A 255 452 - -
Bpe10g00693 623 PANTHER EUKARYOTIC INITIATION FACTOR 4A-2 233 623 - -
Bpe10g00693 623 Gene3D - 459 623 IPR027417 -
Bpe10g00693 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 319 601 IPR027417 -
Bpe10g00693 623 MobiDBLite consensus disorder prediction 1 22 - -
Bpe10g00693 623 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 281 451 IPR014001 -
Bpe10g00693 623 SMART ultradead3 269 466 IPR014001 -
Bpe10g00693 623 CDD SF2_C_DEAD 463 593 - -
Bpe10g00693 623 SMART helicmild6 503 584 IPR001650 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01550 Bpe-Chr2:18538790 Bpe10g00693 Bpe-Chr10:13402013 0 dispersed
Bpe03g01264 Bpe-Chr3:31216963 Bpe10g00693 Bpe-Chr10:13402013 1.47E-63 dispersed
Bpe10g00693 Bpe-Chr10:13402013 Bpe14g00268 Bpe-Chr14:2747626 0 dispersed
Bpe05g00274 Bpe-Chr5:15744927 Bpe10g00693 Bpe-Chr10:13402013 1.04E-55 transposed
Bpe11g01604 Bpe-Chr11:12118098 Bpe10g00693 Bpe-Chr10:13402013 3.60E-06 transposed
Bpe10g00693 Bpe-Chr10:13402013 Bpe06g00785 Bpe-Chr6:18065442 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00693 K03257 - csv:101223055 776.933