Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe10g00693 | ATGGAGCGTCATACGTCGAATCACGAGGGGGAACCGGGCTACGATCGCCAACCATCAAGCCAACGCCTTTACAACCCCTACAAGGACCTACAACTTCCTTACCGTAATTTTCAGCTTTCTACTTCGCCGGAGTTTTTATTCGCCGAGGAGGCTAGCCGCCAGCGCCGATCTTGGAGTGAGAATCTAACCTTCTATACCGGCTGCGGCTACCTTGCGGGCGCTGTCGCCGGCGCCTCCAATGGCTTCGTGACCGGCGTCAAATCCTTTGAATCCGGAGATACGACGAAGCTTCGAGTCAACCGAATCTTGAACGCTTCTGGTCATTCCGGCAGAGTTTGGGGGAACAGGATTGGTGTGATCGGGCTGCTCTATGCAGGTATTGAGAGCGGGATAGTGGCTATGAGGGATACCGACGATGTTTGGAATAGCGTTGCGGCAGGACTAGGCACTGGTGCGTGTTATCGCGCGGCTAGAGGGGTACGATCAGCGGCTGTTGCAGGTGCAGTGGGAGGCGTATTGGTCGGGATGGCGGTGACAGCTAAGCAAGCATTGAAACGTCCCTTGAGAGTAATTAGGAGGTTTTTCTTGTTTCTTTTGACCTTTATTCTTGGTAATGAGAAGTGGGCAAAAGTCATGGCAGGTTTAGCTCCAGAAGGATCCCAGTTTGATGCCAATCAATATGATTTCAAAATGAGTGAGATACAATCTGAAGGACAGGATTTCTTCACCTCTTATGAAGAAGTTTATGAAAGCTTTGATTCTATGGGTTTACAAGAAAACTTGCTGAGGGGCATTTATGCCTATGGTTTTGAGAAGCCCTCTGCAATCCAGCAAAGGGGAATTGTTCCTTTCTGCAAAGGTCTTGATGTGATTCAACAGGCTCAATCTGGAACTGGAAAAACTGCAACATTTTGCTCTGGAATTTTGCAGCAACTCGATTATGGTTTGGTCCAGTGCCAGGCACTGGTTCTAGCACCCACAAGGGAACTGGCTCAACAGATTGAGAAGGTCATGCGAGCTCTAGGTGATTATCTTGGTGTCAAGGTTCATGCTTGTGTTGGAGGGACCAGTGTCCGTGAGGATCAACGCATTCTTCAAGCCGGGGTGCATGTTGTTGTTGGCACTCCTGGTCGAGTATTTGACATGTTGCAAAGACAGTCTCTCCGCCCAGACTACATTAAGATGTTTGTTTTGGATGAGGCTGATGAGATGCTTTCGCGTGGATTCAAGGATCAGATTTACGACATTTTCCAGCTTTTGCCATCAGAAGTTCAGGTTGGAGTTTTCTCAGCAACAATGCCACCCGAAGCTCTGGAAATCACAAGGAAGTTTATGAAGAAGCCTGTAAGAATCTTGGTGAAGCGTGATGAACTTACTTTGGAAGGTATCAAGCAGTTCTATGTTGATGTTGACAAGGAAGATTGGAAACTTGACACACTATGTGATCTTTACGAGACTCTGGCCATCACCCAGAGCGTTATCTTTGTCAACACGCGACGCAAGGTGGATTGGCTGACAGACAAGATGCGCAGTCGGGATCACACAGTATCAGCCACCCATGGAGACATGGACCAGAACACCAGAGATATAATTATGCGAGAATTCCGCTCTGGGTCTTCTCGTGTTCTCATAACAACCGATCTCCTAGCTCGTGGTATTGATGTCCAGCAAGTTTCGCTCGTTATAAACTATGATCTGCCGACACAACCAGAAAATTACCTTCATCGAATTGGTCGAAGTGGACGATTTGGAAGAAAGGGGGTTGCCATCAACTTTGTGACAAGCGATGCTGGTAGAATGTTATCCGACATTCAGAAGTTCTACAACGTGGTAATTGAGGAGCTGCCTGCTAACGTTGCTGATCTCCTGTGA | 1872 | 47.92 | MERHTSNHEGEPGYDRQPSSQRLYNPYKDLQLPYRNFQLSTSPEFLFAEEASRQRRSWSENLTFYTGCGYLAGAVAGASNGFVTGVKSFESGDTTKLRVNRILNASGHSGRVWGNRIGVIGLLYAGIESGIVAMRDTDDVWNSVAAGLGTGACYRAARGVRSAAVAGAVGGVLVGMAVTAKQALKRPLRVIRRFFLFLLTFILGNEKWAKVMAGLAPEGSQFDANQYDFKMSEIQSEGQDFFTSYEEVYESFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLQRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSEVQVGVFSATMPPEALEITRKFMKKPVRILVKRDELTLEGIKQFYVDVDKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDAGRMLSDIQKFYNVVIEELPANVADLL | 623 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 13402013 | 13407293 | - | Bpe003003.1 | Bpe10g00693 | 109815 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe10g00693 | 623 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 462 | 623 | IPR001650 | - | |
Bpe10g00693 | 623 | PANTHER | RNA HELICASE | 233 | 623 | - | - | |
Bpe10g00693 | 623 | Pfam | DEAD/DEAH box helicase | 275 | 436 | IPR011545 | GO:0003676|GO:0005524 | |
Bpe10g00693 | 623 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 64 | 173 | - | - | |
Bpe10g00693 | 623 | Pfam | Helicase conserved C-terminal domain | 476 | 584 | IPR001650 | - | |
Bpe10g00693 | 623 | Gene3D | - | 240 | 458 | IPR027417 | - | |
Bpe10g00693 | 623 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 250 | 278 | IPR014014 | GO:0003724 | |
Bpe10g00693 | 623 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 397 | 405 | IPR000629 | - | |
Bpe10g00693 | 623 | CDD | DEADc_EIF4A | 255 | 452 | - | - | |
Bpe10g00693 | 623 | PANTHER | EUKARYOTIC INITIATION FACTOR 4A-2 | 233 | 623 | - | - | |
Bpe10g00693 | 623 | Gene3D | - | 459 | 623 | IPR027417 | - | |
Bpe10g00693 | 623 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 319 | 601 | IPR027417 | - | |
Bpe10g00693 | 623 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Bpe10g00693 | 623 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 281 | 451 | IPR014001 | - | |
Bpe10g00693 | 623 | SMART | ultradead3 | 269 | 466 | IPR014001 | - | |
Bpe10g00693 | 623 | CDD | SF2_C_DEAD | 463 | 593 | - | - | |
Bpe10g00693 | 623 | SMART | helicmild6 | 503 | 584 | IPR001650 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01550 | Bpe-Chr2:18538790 | Bpe10g00693 | Bpe-Chr10:13402013 | 0 | dispersed | |
Bpe03g01264 | Bpe-Chr3:31216963 | Bpe10g00693 | Bpe-Chr10:13402013 | 1.47E-63 | dispersed | |
Bpe10g00693 | Bpe-Chr10:13402013 | Bpe14g00268 | Bpe-Chr14:2747626 | 0 | dispersed | |
Bpe05g00274 | Bpe-Chr5:15744927 | Bpe10g00693 | Bpe-Chr10:13402013 | 1.04E-55 | transposed | |
Bpe11g01604 | Bpe-Chr11:12118098 | Bpe10g00693 | Bpe-Chr10:13402013 | 3.60E-06 | transposed | |
Bpe10g00693 | Bpe-Chr10:13402013 | Bpe06g00785 | Bpe-Chr6:18065442 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe10g00693 | K03257 | - | csv:101223055 | 776.933 |