Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00696 ATGAACTTGGGTGCGGAGGAGGAAGAATCAACGCAAGAGATACATATTCCGGCGGACATCGATTGGGAGATGCTTGACAAATCAAAGTTTTTCTTCCTCGGCGCCGCCTTATTTTCAGGTGTGTCTGCGTCTCTGTACCCTATTGTGGTGTTGAAAACCCGGCAACAAGTGGCTCAATCGCAGCTCTCTTGCATCAGAACGGCGTTCGCCATCGTTCGACACGAGGGGTTTCGAGCTCTGTACAGAGGATTCGGAACTTCCCTGATGGGAACCATTCCAGCAAGAGCACTATACATGGGCGCACTCGAGGTCACCAAGAGCAACATATGGACTGCGACCGTTAGGTTAGGGGTTCCCGAGGCAACAGCCGCGACCATTGCCAATGCTGCAGCTGGGTTGAGCGCAGCCATGGCTGCACAGGTTGTGTGGACTCCTGTGGATGTTGTGAGCCAAAGACTAATGGTTCAGAGTGGATGTAGTAGTAGCGGTAGTAGGTATCTTAATGGAATCGATGCATTTAGAAAAATCCTCAACACAGATGGCCCGAGGGGTCTGTACAGGGGGTTTGGGATCTCAATTCTGACTTACGCTCCCTCAAATGCACTTTGGTGGGCATCATACTCAATGGCACAGCGTGTGGTTTGGGGCGGAATTGGATGCTATTTCGTGAAGAAAGACGAAGATGGTGATGGAAATAAGCCTAATGTGTTTCGGCCCGATTCAAAAACCGTAATGGCTGTTCAGGGACTCAGTGCAGCCATGGCTGGGGGCGTTTCGGCTTTAATAACTATGCCTCTCGACACAATCAAGACAAGATTGCAGGTTTTGGATGGCGAGGAAAACGGAAGACCGAGGCCCTCGATGGGACAGACGGTGAGGAATTTGGTGAAGGAAGGCGGCTGGTCGGCCTGTTACAGAGGGCTGGGACCTCGATGGGCTTCCATGTCAATGTCTGCGACGACCATGATCACTACCTATGAGTTTCTGAAGCGGCTCTCCACCAAAAATCAAGACGGGTTCACTGGCTGA 1029 51.51 MNLGAEEEESTQEIHIPADIDWEMLDKSKFFFLGAALFSGVSASLYPIVVLKTRQQVAQSQLSCIRTAFAIVRHEGFRALYRGFGTSLMGTIPARALYMGALEVTKSNIWTATVRLGVPEATAATIANAAAGLSAAMAAQVVWTPVDVVSQRLMVQSGCSSSGSRYLNGIDAFRKILNTDGPRGLYRGFGISILTYAPSNALWWASYSMAQRVVWGGIGCYFVKKDEDGDGNKPNVFRPDSKTVMAVQGLSAAMAGGVSALITMPLDTIKTRLQVLDGEENGRPRPSMGQTVRNLVKEGGWSACYRGLGPRWASMSMSATTMITTYEFLKRLSTKNQDGFTG 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13418400 13419428 + Bpe003006.1 Bpe10g00696 109818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00696 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 213 IPR018108 -
Bpe10g00696 342 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 338 - -
Bpe10g00696 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Bpe10g00696 342 Pfam Mitochondrial carrier protein 126 214 IPR018108 -
Bpe10g00696 342 Pfam Mitochondrial carrier protein 246 336 IPR018108 -
Bpe10g00696 342 Pfam Mitochondrial carrier protein 38 109 IPR018108 -
Bpe10g00696 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 243 332 IPR018108 -
Bpe10g00696 342 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Bpe10g00696 342 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Bpe10g00696 342 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 338 - -
Bpe10g00696 342 Gene3D Mitochondrial carrier domain 29 340 IPR023395 -
Bpe10g00696 342 SUPERFAMILY Mitochondrial carrier 23 329 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00723 Bpe-Chr3:27339621 Bpe10g00696 Bpe-Chr10:13418400 5.12E-09 dispersed
Bpe04g00116 Bpe-Chr4:804176 Bpe10g00696 Bpe-Chr10:13418400 3.10E-162 dispersed
Bpe10g00696 Bpe-Chr10:13418400 Bpe13g00001 Bpe-Chr13:1252 3.70E-23 dispersed
Bpe10g00696 Bpe-Chr10:13418400 Bpe15g01267 Bpe-Chr15:21111038 3.20E-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00696 K15121 - cpap:110818441 549.666