Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00717 ATGTTTCATCCTCAAGGAGCTGTTAGACGAACTTGTCGACTCCTTGCTGTCACCAGTGATGATTTACTTGAACATAAATGGAAAAAGGATGATGCGGAGGAGCATTTAAGATATCCCTTTCCAGAGCTACACTCTTCAGGGCGTTTAGAGGTCCGGAGTTTAGCGAGCCCGAGCAGAGCAGAATTCAGCAAACTTGTTGAATCATATCAACCAAATTTAATTTACTTGAGAGGGGTTGTACTCGAGAATGATGAAATTGGATCTTTGTCATGGAAAGGTGTTGATTTGTCCACTGTTGAAGCAATACATGATCTCTTTGTCACTACATTCCCGATCACTGTTTATCTTGAACTCACAAATGGAGAGGAATTGGCAAAGACACTTCACTCAAAGGGTATCCCGTATGTGATATATTGGAAGAACACTTTTTCGCGCTACGCAGCTAGCCATTTCTGTAATGCATTTCTTTCCGTTTTGCAAAGCTCGTCTGCTCATACGTGGGACGTGTTTCAACTTGCTCACGCCTCCTTTAGGCTTTACTGCTCTCAAAATAATAATCTCCATCTTAGGAATGAACATGAAGTTAGTGATGATTTTTGCCCACAACTTCTCGGGGAGCCATTAAAAATTAATATTGAACCTTCAGAGTCGGATATGGCCAAAGATGAAGAAGAAGATTCTTTGGGAACTCTCCCTGCCGTAAATATATATGCTGATGATGTGAGCATGAAGTTTCTTGTGTGTGGAGAACTGTGCAAGTTGGATGCATACTTACTTGGAGCTTTAGAGGATGGACTTAACGCCCTTTTGAACATCGAAATTCGAGGTAGCAAATTGCATGGCAAGTTTAGTGCTCCTCCACCTTCTCTTCAGGCGGAAATATTTTCTCCCGGAGTTGTGACAATGCGATGTGATATATCGACCACTACTTATGCTCATATCGCACTTTTGTTATCGGGTAGTGCACAAACATGTTTTGACGATCAGCTTTTGGAAAATCACATAAAAAAAGAAATTATTGAAAACAGCCAACCAGTTCATGCTATTACTGACAGTGAGGAGAGCAAAGTTCCACCATCGGAGCCTCGAAAATCTGCGTCAGTTGCTTGTGGGGCAGCGGTATTCGAAGTTGGTATGAAGATCCCTAACTGGGCTTCTCAGATTTTGAGGCAGCTAGCACCGGATATTTCCTATCGTAGCTTAGTAGCACTGGGTATTGCCTGCATACAGGGAGTACCCATTGCTTCGTTCGAGAGAGATGATGCTGATCGACTTCTTTACTTCCATCCAAAGCATGGACAAGACAGGTTTGCTAGTAATTCGATTCTTTATACCTCTCCAAGTTGGTTGACGCCGCCTGCCCCAACCCGAAAGAGGTCTAAGCCAGGAATAAATGGTGGTTTTCTTAGTAGCCTTGCCCGTCCAAACTTGTCCTCTGCTAGGATTGATGGACAAAACAAGGAGATGGCACTGATGCATGGCTTCAGCACATCCTTACTGCCGCCTCGGCAAAGGTTGAAAGTCCCGGCAATGAGGCCCATTCCTCGCCTTCATCGCCATAAAATGACACTTTTATCTGGACCGGCTGAGGCAAATGGCCATGATAGAGGGCAAATTAAGCCTAAAATAACAGTTGTTACTCCTCCGAAGCACGTTTTCGTTAGATCAACTTCTGGACAACAGCAAAAATTATGTTCGAGCTCGTCTCAGTCTAAGCAAATTATGTCCCTCAATCCACTGCCCTTGAAGAAGCATGGTTGTGGCAGAAACCCAATACATGATTGCTCTGAGGAGGATTTTCTGAAGGATGTACTGCAGTTTATGGTTGAACGAGGACACACCCGCCTTGTTCCTCCCGGTGGGCTCAGTGAGTTTCCAGATGCTGTACTCAATGGAAAGCGTCTCGACCTTTACAACTTGTACAAGGAGGTGGTTTCCAGAGGCGGATTTCGTGTTGGCAATGGTATCAACTGGAAAGGACAGATCTTTTCAAAAATGAGAAATTACACGATGACCAATAAAATGACAGGGGCCGGGAATACGCTGAAAAGGCACTACGAAACATACCTTCTCGAATATGAACTGGCTCACGATGATGTTGACGGGGAATGCTGCTTATTGTGTCACAGTAATGCCGCCGGAGATTGGGTGAATTGCGGGATCTGTGGTGAGTGGGCTCACTTTGGCTGTGATCGACGGCAAGGACTCGGTGCATTTAAGGATTATGCAAAAACAGCGGGTCTGGACTACATATGTCCACACTGCAGCAATACGAGTTTCAAGAGGAGACCGCCAAATGTTCGAAATGGGTTTTCCCAAAGCCTACTTGCCTCGCAGCCGTCGGGCGACTGA 2352 44.98 MFHPQGAVRRTCRLLAVTSDDLLEHKWKKDDAEEHLRYPFPELHSSGRLEVRSLASPSRAEFSKLVESYQPNLIYLRGVVLENDEIGSLSWKGVDLSTVEAIHDLFVTTFPITVYLELTNGEELAKTLHSKGIPYVIYWKNTFSRYAASHFCNAFLSVLQSSSAHTWDVFQLAHASFRLYCSQNNNLHLRNEHEVSDDFCPQLLGEPLKINIEPSESDMAKDEEEDSLGTLPAVNIYADDVSMKFLVCGELCKLDAYLLGALEDGLNALLNIEIRGSKLHGKFSAPPPSLQAEIFSPGVVTMRCDISTTTYAHIALLLSGSAQTCFDDQLLENHIKKEIIENSQPVHAITDSEESKVPPSEPRKSASVACGAAVFEVGMKIPNWASQILRQLAPDISYRSLVALGIACIQGVPIASFERDDADRLLYFHPKHGQDRFASNSILYTSPSWLTPPAPTRKRSKPGINGGFLSSLARPNLSSARIDGQNKEMALMHGFSTSLLPPRQRLKVPAMRPIPRLHRHKMTLLSGPAEANGHDRGQIKPKITVVTPPKHVFVRSTSGQQQKLCSSSSQSKQIMSLNPLPLKKHGCGRNPIHDCSEEDFLKDVLQFMVERGHTRLVPPGGLSEFPDAVLNGKRLDLYNLYKEVVSRGGFRVGNGINWKGQIFSKMRNYTMTNKMTGAGNTLKRHYETYLLEYELAHDDVDGECCLLCHSNAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTAGLDYICPHCSNTSFKRRPPNVRNGFSQSLLASQPSGD 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13562254 13566861 - Bpe003028.1 Bpe10g00717 109839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00717 783 Gene3D - 591 697 IPR036431 GO:0003677
Bpe10g00717 783 CDD PHD_ARID4_like 704 755 - -
Bpe10g00717 783 SUPERFAMILY FYVE/PHD zinc finger 694 763 IPR011011 -
Bpe10g00717 783 SMART ARID_2 591 694 - -
Bpe10g00717 783 ProSiteProfiles ARID domain profile. 594 698 IPR001606 GO:0003677
Bpe10g00717 783 SUPERFAMILY ARID-like 594 709 IPR036431 GO:0003677
Bpe10g00717 783 SMART bright_3 595 699 IPR001606 GO:0003677
Bpe10g00717 783 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 698 761 IPR013083 -
Bpe10g00717 783 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 1 771 IPR042293 -
Bpe10g00717 783 CDD ARID 596 694 - -
Bpe10g00717 783 Pfam ARID/BRIGHT DNA binding domain 597 694 IPR001606 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00693 Bpe10g00717 CCT
Bpe03g00693 Bpe10g00717 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00717 Bpe-Chr10:13562254 Bpe03g00693 Bpe-Chr3:27034219 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21970 PF01388 ARID 1.10E-15 CL0123 Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00717 - - jre:109004980 1091.26