Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00784 ATGAAGCTGACTCCAAGAGAGGTGGAGAAACTAGGTTTGCACAATGCAGGATATCTTGCGCAGAAACGTCTTGCTCGAGGACTGAGGCTAAATTATACTGAAGCTGTGGCTCTCATTGCCTCACAGATTTTGGAGTTTGTTCGGGATGGTGATAGAAGTGTAGCAGAATTGATGGACATAGGAAAGCAACTTTTAGGAAGGAGGCAGGTTCTTTCAGCTGTTCCACGCCTTATGGACACTGTGCAGGTGGAAGGAACATTTCCCGATGGAACTAAGTTAGTCACCATTCATGATCCAATTGCTAGCGAAAATGGGAATCTGGAGCTAGCTTTCTATGGATCTTTTCTTCCAATTCCTTCACTAGAGGCATTTCCTGGCATCGAAAGCAATACATTTCCTGGTGAAATTGTCTTTGGAGGTGGAAGTATTACAATTAATCCCGGAAGGAAAGCTGTAATCCTCAAAGTTGTTAATAATGGAGACCGGCCCATTCAGGTTGGCAGCCATTATCATTTTATTGAGGTTAACCCTTTCTTGGTGTTTGATCGTTGGAAATCACATGGCATGCGCTTGAACATACCGGCTGGGACTGCCACACGTTTTGAGCCAATTTTAGTTTTTGTCCAGCCTGGGGAAGCTAAAAGTGTAGTCCTCGTCTCTATCAGTGGTAACAAAGTTATCAGAGGGGGAAATAGCTTTGCTGATGGTCCAGTTGATGGCACTAAATTTGAAGCATTCATGTCAGTTGTAAGCATGAAAAAGATTGGAACTATTGAAGACAAAAATGCCAGAGAAGGTGTTACCGGCGAAGATCCTGAATTCACCAGTGTAATTTCACGCGAGGCATATGCAAATATGTACGGTCCTACTATTGGTGACAAAATTCGACTAGGTGATACGGACTTATATGCTGAAATTGAACACGACTTTGCTGCTTATGGTGATGAATGTGTATTTGGAGGTGGCAAGGTTATACGAGAGGGGATGGGTCAGTCGTGTGGACATCTACCGGCTGACTCTCTGGATACTGTAATAACAAATGCTGTGATCATTGATTATAGTGGAATAATCAAGGCAGATATTGGTATCAAAGACGGTATTATAGTTTCCCTGGGAAAATCTGGCAATCCAGATGTCATGCATGGTGTTCATAGTAAAATGATCATTGGGGCTAACACTGAGGTTATTGCTGGAGAAGGATTAATCATTACAGCAGGAGCTATAGATTGTCACGTGCACTTTATATGCCCTCAGCTTGCATATGAGGCAATCACCGGTGGCATTACTACTTTAGTGGGAGGTGGAACTGGGCCAGCTAGTGGAACTCGTGCTACTACTTGTACACCATCCATTTTACAGATGATGTTAATGCTCCAATCAACAGATGATATGCCTTTAAATTTTGGTTTTACAGGCAAAGGAAATAGTTCTCATCCTGATGAGCTACATGAAATAATAAAGGCGGGAGCAATGGGTTTGAAATTGCACGAGGATTGGGGAAGTACTCCAGCTGCAATAGACAATTGTTTAGCTGTTAATATACATACTGACACCTTAAATGAATCTGGCTTTGTGGAACATACAATTGCGGCATTTAAAGGAAGAACAATACACACATACCACAGTGAAGGTGCTGGAGGTGGTCATGCCCCAGATATCATTTGCGTTTGTGGTGTGAAAAATGTTCTGCCGTCTTCAACAAATCCCACACGGCCCTTCACATCCAATACTATTGATGAGCATCTTGACATGCTGATGGTTTGTCATCACCTTGATAAGGACATACCAGAAGATGTTGCTTTCGCTGAATCAAGGATACGAGAGGATACAATTGCTGCCGAAGACATTTTGCATGACATGGGAGCAATTAGTATTATTTCTTCTGATTCACAGGCAATGGGTCGCATAGGAGAGGTTATAAGCAGAACTTGGCAAACTGCACACAAGATGAAAATACAAAGAGGACCTCTTGGTTCCGATGGGCCAAACAGTGACAACCTTAGGATCAAACGTTATATTTCCAAATACACAATAAATCCAGCAATAGTAAATGGCTGCTCTGAGTATATCGGATCAGTAGAGGGTTATACTTTTATTATAAAAATGATCAAAACAAGAACGCTGTTAATAAAATTTGAAGCTATGGTGTCGTGGAATATTTTACTGTCTGGAGTCTCCATAACTTACTCTGAAATTGGAGGTTTTCTTGTGGGGAAGTTGGCAGATCTGGTTCTGTGGAATCCATCTTTTTTTGGTGCAAAACCAGAAATGGTAATTAAAGGTGGTGCTATTGCCTATGCAAATATGGGAGATCCAAATGCTAGTATCCCTACACCTGAACCGGTACTCATGAGACCAATGTTTGGAGCCTTTGGCAAAGCGGGAAGCGCTCATTCCATTGCATTTCAGGCAGCTCTAGAGAAAGGGGTTAAGGCCTCGTATGGGCTCAGCAAGAGAGTTGAAGCAGTGAGCAATGTTAGGAAACTCACAAAACTTGACATGAAATTTAATGACGCACTTCCACACATCACCGTTGATCCAGAAACCTACACAGTTACAGCAGACGGAGAGATCCTCACCTGTGCTGCCGCAGACACAGTTCCTCTTTCTAGGAATTACTTCCTATTTTAA 2631 42.38 MKLTPREVEKLGLHNAGYLAQKRLARGLRLNYTEAVALIASQILEFVRDGDRSVAELMDIGKQLLGRRQVLSAVPRLMDTVQVEGTFPDGTKLVTIHDPIASENGNLELAFYGSFLPIPSLEAFPGIESNTFPGEIVFGGGSITINPGRKAVILKVVNNGDRPIQVGSHYHFIEVNPFLVFDRWKSHGMRLNIPAGTATRFEPILVFVQPGEAKSVVLVSISGNKVIRGGNSFADGPVDGTKFEAFMSVVSMKKIGTIEDKNAREGVTGEDPEFTSVISREAYANMYGPTIGDKIRLGDTDLYAEIEHDFAAYGDECVFGGGKVIREGMGQSCGHLPADSLDTVITNAVIIDYSGIIKADIGIKDGIIVSLGKSGNPDVMHGVHSKMIIGANTEVIAGEGLIITAGAIDCHVHFICPQLAYEAITGGITTLVGGGTGPASGTRATTCTPSILQMMLMLQSTDDMPLNFGFTGKGNSSHPDELHEIIKAGAMGLKLHEDWGSTPAAIDNCLAVNIHTDTLNESGFVEHTIAAFKGRTIHTYHSEGAGGGHAPDIICVCGVKNVLPSSTNPTRPFTSNTIDEHLDMLMVCHHLDKDIPEDVAFAESRIREDTIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTAHKMKIQRGPLGSDGPNSDNLRIKRYISKYTINPAIVNGCSEYIGSVEGYTFIIKMIKTRTLLIKFEAMVSWNILLSGVSITYSEIGGFLVGKLADLVLWNPSFFGAKPEMVIKGGAIAYANMGDPNASIPTPEPVLMRPMFGAFGKAGSAHSIAFQAALEKGVKASYGLSKRVEAVSNVRKLTKLDMKFNDALPHITVDPETYTVTADGEILTCAAADTVPLSRNYFLF 876
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14005456 14012345 - Bpe003090.1 Bpe10g00784 109906

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00784 876 PANTHER UREASE 1 696 - -
Bpe10g00784 876 PANTHER UREASE 730 876 - -
Bpe10g00784 876 TIGRFAM urease_gam: urease, gamma subunit 1 102 IPR002026 GO:0016151|GO:0043419
Bpe10g00784 876 Pfam Urease alpha-subunit, N-terminal domain 278 396 IPR011612 -
Bpe10g00784 876 ProSitePatterns Urease active site. 586 602 IPR017950 GO:0009039
Bpe10g00784 876 PRINTS Urea amidohydrolase (urease) protein signature 603 619 IPR005848 GO:0006807|GO:0009039|GO:0016151
Bpe10g00784 876 PRINTS Urea amidohydrolase (urease) protein signature 670 685 IPR005848 GO:0006807|GO:0009039|GO:0016151
Bpe10g00784 876 PRINTS Urea amidohydrolase (urease) protein signature 564 581 IPR005848 GO:0006807|GO:0009039|GO:0016151
Bpe10g00784 876 SUPERFAMILY Urease, beta-subunit 132 267 IPR036461 -
Bpe10g00784 876 SUPERFAMILY Composite domain of metallo-dependent hydrolases 277 453 IPR011059 GO:0016810
Bpe10g00784 876 TIGRFAM urease_alph: urease, alpha subunit 278 695 IPR005848 GO:0006807|GO:0009039|GO:0016151
Bpe10g00784 876 ProSiteProfiles Urease domain profile. 406 876 IPR017951 GO:0006807|GO:0009039|GO:0016151
Bpe10g00784 876 SUPERFAMILY Composite domain of metallo-dependent hydrolases 731 790 IPR011059 GO:0016810
Bpe10g00784 876 CDD Urease_gamma 4 100 IPR002026 GO:0016151|GO:0043419
Bpe10g00784 876 CDD Urease_beta 133 238 IPR002019 GO:0035550|GO:0043419
Bpe10g00784 876 Pfam Amidohydrolase family 402 694 IPR006680 GO:0016787
Bpe10g00784 876 SUPERFAMILY Urease, gamma-subunit 1 104 IPR036463 GO:0016151|GO:0043419
Bpe10g00784 876 Pfam Urease beta subunit 133 236 IPR002019 GO:0035550|GO:0043419
Bpe10g00784 876 CDD Urease_alpha 278 875 IPR005848 GO:0006807|GO:0009039|GO:0016151
Bpe10g00784 876 TIGRFAM urease_beta: urease, beta subunit 132 239 IPR002019 GO:0035550|GO:0043419
Bpe10g00784 876 Gene3D Urease, beta subunit 149 275 IPR036461 -
Bpe10g00784 876 Hamap Urease subunit alpha [ureC]. 276 876 IPR005848 GO:0006807|GO:0009039|GO:0016151
Bpe10g00784 876 Gene3D - 4 124 IPR036463 GO:0016151|GO:0043419
Bpe10g00784 876 Pfam Urease, gamma subunit 1 100 IPR002026 GO:0016151|GO:0043419
Bpe10g00784 876 ProSitePatterns Urease nickel ligands signature. 404 417 IPR029754 GO:0016151
Bpe10g00784 876 Gene3D - 406 857 - -
Bpe10g00784 876 Gene3D Urease, subunit C, domain 1 276 791 IPR011059 GO:0016810
Bpe10g00784 876 SUPERFAMILY Metallo-dependent hydrolases 407 876 IPR032466 -
Bpe10g00784 876 PIRSF Urease 1 708 IPR008221 GO:0006807|GO:0009039|GO:0016151
Bpe10g00784 876 PIRSF Urease 719 876 IPR008221 GO:0006807|GO:0009039|GO:0016151
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00784 K01427 URE; urease [EC:3.5.1.5] - jre:109014748 1375.92
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1171 . . . . . Bpe10g00784 . . Cmo04g01918 Cmo18g00700 . Cma18g00712 . Car18g00657 Sed06g0143 Cpe09g00577 Cpe01g01606 Bhi07g01896 Tan04g0084 Cmetu10g0294 Lac13g0072 . . . . . . . . . . . . . . Lsi04g00663 . . Cme10g00641 Blo06g00828 . . . . . . . . . . Cma04g01821 . Car04g01834 . . . . . . . . . . Cla11g01357 . Cec11g1442 Cco11g1438 Clacu11g1572 Cmu11g1392 Cre11g1813 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003364 1 2 1 1 1 0 2 1 2 1 1 1 2 1 1 2 2 2 2 1 1 1 1 3 3 2 2 3 5 1 49
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe10g00784 Bpe_Chr10 FPKM 18.252069 20.86783 56.650417 52.874355 32.304852 28.444365 31.811941 88.347977 96.006981 95.217224