Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00785 ATGTGCCAGGCGCTTTCTGCAATATATGGCAAAGTGATGTCAATTTTTCCTTCCTTGGAAGCAGCACGGCCAAGAAGCAAATCTGGGATTCGTGCATTATGTTCCTTGCATGTAGCATTAGAAAAGGCAAAAAATATTCTTCAACACTGCTCGGAGTCCAGTAAACTTTACTTGGCCATAACTGGGGATTCTGTACTCTCAAAATTTGATAAGGCAAGATGCGCGCTTGAAGATAGTCTGAGATGCGTTGAAGATATTGTGCCACAATCAATTGGCTATCTGCTGTTTCAGATTTATGTGGTAGAGTATAATGAGACGTATTATCCTCAAAATATATCTGATTTTTTTTTTCTTTTGCAGATTCAAGGGATAGTCAGTGAACTTGAGGGCACTGTGTTTTCTCTTGATCCTTTTGAGAAACAAATTGGTAATGATATTATCCCTCTTCTCCAGCAGGGGAGGAAGTTCAGCAATTCCAAAAACAATAATGAGCTAGAGTTATTTCACCAAGCTGCCATTAAACTTGGAATAACCTCCTCTAGAGCAGCCCTTGCAGAGAGAAGAGCTCTTAAGAAACTTCTAGATAGGGCTCATGCTGAAGAAGATAAGCGGAAGGAATCTATCGTGGCTTATCTATTACATCTCATGAGGAAATACTCCAAATCTTTTAGATGTGAATTGTCAGATGACAATGATTCCCAGGGCTCTGCACCTTGTTCTCCCACTGTTCAGGGTTCGCTTGATGACATTGATTCTGGACGGGATGGAAATAGAAATTACTTCGAAAGACAGATTTCAAAATGTAGTTCTTCTAATTTGAAGTCAAGTAATAAGGAATCACAGCAGATGCTTGTCCCACCAGAGGAATTGAGGTGTCCAATATCTTTGCAGCTTATGTTTGATCCTGTTATCGTTGCATCTGGTCAAACATATGAAAGGTTCTGCATTGAAAAATGGTTTAATGATGGACGTAATACCTGCCCAAAAACACAACAGAAGCTCTCTCATCTTTCATTGACACCCAATTACTGTGTCAAGGGTGTTATTGCTACTTGGTGCGAAGAGAATGGACTCTCTATTCCTGATGGCCCTCCAGAGTCTATTGACCTCAGCTATTGGAAACTCATGCCTGCATCCGAGCCTTCAAACGCAAGTTTTACTGATTATTCCGAGACAAAAAAAGCGAAGGTAGTTCCATCGGAAAGTTGTGGAATTGTGGGGGAGGCTGACAGAAGTGAGGCAGATAATATGTCTGTGCAGGAGGAAACTTCTGAACCTAACGTGTTTGGTAGCTATAGGAATTTGTTGGTAGCCTTGAGTGGAGGAGACTGGATGAAAAAGTGCAAGGCAGTGGAGAAGATAAGGATCTTGCTGAAGGAGGATGTAGATGCTAGGGACTTTATGGGAGCTAGTGGCTTTGTGGAGGCACTTTTGGAATTTCTAAACTTAGCTTTGCATGAAAGGAATCTAAGCGCTCAGGAAAGTGGATCGATGGCTCTCTTCAACCTTGCCGTGAACAATAATAGAAACAAAGAGATGATGTTAGAGGCGGGAGTAATTATGTTGTTGGAGAAAATGATACTGAACTCAAACTCACATGGATATGCAGCTGCCCTTTATCTAAATCTCTCCTGTCTTGAAGATGCAAAGTCTATCATTGGCTCAAGTAGAGCCGTCTCATTCATGACTCATCTACTCACAGGAACAGCTTCACCTCAATGGAAGTTCGATGCATTACATTCACTTTATAATCTCTCCACATTGCCGTCCAATATTCCATACCTTCTCTGTGCCGGCATTGTGAGTAGCCTTCAAGAACTTTTGGCAGGTTCTGATGACCACATTTGGAACGAAAGATCTACTGCCATCTTGATAAACTTAGCTTCGGATCAATCAGGGAGAGATGAGATGATATCATTTCCTGGCCTCATTAGTTCACTGGCAACTATATTGGACACTGGTGAACCTGTAGAGCAAGAGCAAGTTATTGAATGCCTCCTCCTTTTGTGCAATGCAGATGAAAAATGCAGTGAAATGGTGTTAAGGGAAGGAGTTATTCCGGGATTGGTATCAATCTCCGTGAATGGGACAACGAGCGGCATAGAAAACGCGCAGAAACTTCTACTATTATTTCGGGAGAGGAGGCAACAAGACCAACCACCCATCTGTTACATGAATCAGGACGAAGAAAGCAGTGGGATGGCCATGCCTGCTCCAGAATCTAATCCATTTTGCAAATCAATTTCAAGAAGAAAATCAGGAAAAGCTCTTGGATTTCTATGGAAAAGAAGGAGCTATTCAGTCTACCAATGTTGA 2316 41.8 MCQALSAIYGKVMSIFPSLEAARPRSKSGIRALCSLHVALEKAKNILQHCSESSKLYLAITGDSVLSKFDKARCALEDSLRCVEDIVPQSIGYLLFQIYVVEYNETYYPQNISDFFFLLQIQGIVSELEGTVFSLDPFEKQIGNDIIPLLQQGRKFSNSKNNNELELFHQAAIKLGITSSRAALAERRALKKLLDRAHAEEDKRKESIVAYLLHLMRKYSKSFRCELSDDNDSQGSAPCSPTVQGSLDDIDSGRDGNRNYFERQISKCSSSNLKSSNKESQQMLVPPEELRCPISLQLMFDPVIVASGQTYERFCIEKWFNDGRNTCPKTQQKLSHLSLTPNYCVKGVIATWCEENGLSIPDGPPESIDLSYWKLMPASEPSNASFTDYSETKKAKVVPSESCGIVGEADRSEADNMSVQEETSEPNVFGSYRNLLVALSGGDWMKKCKAVEKIRILLKEDVDARDFMGASGFVEALLEFLNLALHERNLSAQESGSMALFNLAVNNNRNKEMMLEAGVIMLLEKMILNSNSHGYAAALYLNLSCLEDAKSIIGSSRAVSFMTHLLTGTASPQWKFDALHSLYNLSTLPSNIPYLLCAGIVSSLQELLAGSDDHIWNERSTAILINLASDQSGRDEMISFPGLISSLATILDTGEPVEQEQVIECLLLLCNADEKCSEMVLREGVIPGLVSISVNGTTSGIENAQKLLLLFRERRQQDQPPICYMNQDEESSGMAMPAPESNPFCKSISRRKSGKALGFLWKRRSYSVYQC 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14013626 14016585 - Bpe003091.1 Bpe10g00785 109907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00785 771 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 7 119 733 - -
Bpe10g00785 771 Gene3D - 431 709 IPR011989 -
Bpe10g00785 771 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 286 360 IPR013083 -
Bpe10g00785 771 CDD RING-Ubox_PUB 290 332 IPR045210 -
Bpe10g00785 771 SUPERFAMILY RING/U-box 275 362 - -
Bpe10g00785 771 ProSiteProfiles U-box domain profile. 285 359 IPR003613 GO:0004842|GO:0016567
Bpe10g00785 771 PANTHER U BOX DOMAIN-CONTAINING 119 733 - -
Bpe10g00785 771 MobiDBLite consensus disorder prediction 230 253 - -
Bpe10g00785 771 SMART Ubox_2 289 352 IPR003613 GO:0004842|GO:0016567
Bpe10g00785 771 PANTHER U BOX DOMAIN-CONTAINING 1 104 - -
Bpe10g00785 771 Pfam U-box domain 287 356 IPR003613 GO:0004842|GO:0016567
Bpe10g00785 771 MobiDBLite consensus disorder prediction 230 247 - -
Bpe10g00785 771 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 7 1 104 - -
Bpe10g00785 771 SUPERFAMILY ARM repeat 435 693 IPR016024 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00768 Bpe-Chr8:9485062 Bpe10g00785 Bpe-Chr10:14013626 1.84E-17 dispersed
Bpe10g00785 Bpe-Chr10:14013626 Bpe08g01367 Bpe-Chr8:14743875 1.62E-50 dispersed
Bpe10g00785 Bpe-Chr10:14013626 Bpe13g01504 Bpe-Chr13:20431440 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00785 - - qsu:112018265 966.837