Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00821 ATGGCGAGAAACGGCGTCGTTGCTTGGAGGAAACGGTTCGGGAAAACGCAGAGTGGATGCTGTGATTCATTTCCCATGTCTGATTCAGATGAAGTTCACGTCCTCGCCGTGGATGACAGTCTGATTGATCGGACTGTGATTGAACGCTTGCTCAAAATTTCTTCCTGCAAAGTTACGGCGGTGGACAGCGGGAGGAGAGCTCTGCAATACCTCGGATTAGATGACGAAACAAGCTCCTCCGATGACTTCGACGGTCTGAAAGTGGACATGATCATCACCGATTACTGCATGCCGGGAATGACCGGGTTCGAGTTGCTCAAGAAAATTAAGGAATCATCTACGCTAAGAGAAATACCCGTGGTAATCATGTCGTCGGAAAATATATTAGCCCGAATAGACAGCAGGTGTTTGGAAGAAGGGGCAGAGGATTTCATAGTGAAACCGGTGAAATTATCAGATGTGGAAAGGCTCAGGGATTACATGAAGAGAGACTCCATTAATGAACATAGCAGAAGTGGGGTCCACAAAAGGAAAGTGCGAGATTTCATTGACGTGGAGTCATCGTCACCGTCCATTTCATCATTTTCGCCATCAAGATCTTCGTCGTGTTCATCATCGTCTGTTCCATCTTCTCCCCCTACGTCCCTCGATTCGCCGATCGGACGGCTGAAAATGACCACGACCACGATAGATTGA 696 47.84 MARNGVVAWRKRFGKTQSGCCDSFPMSDSDEVHVLAVDDSLIDRTVIERLLKISSCKVTAVDSGRRALQYLGLDDETSSSDDFDGLKVDMIITDYCMPGMTGFELLKKIKESSTLREIPVVIMSSENILARIDSRCLEEGAEDFIVKPVKLSDVERLRDYMKRDSINEHSRSGVHKRKVRDFIDVESSSPSISSFSPSRSSSCSSSSVPSSPPTSLDSPIGRLKMTTTTID 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14251925 14252987 - Bpe003125.1 Bpe10g00821 109943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00821 231 MobiDBLite consensus disorder prediction 186 231 - -
Bpe10g00821 231 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 226 IPR045279 GO:0009736
Bpe10g00821 231 SMART REC_2 32 158 IPR001789 GO:0000160
Bpe10g00821 231 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 15 226 - -
Bpe10g00821 231 CDD REC_typeA_ARR 34 157 - -
Bpe10g00821 231 SUPERFAMILY CheY-like 32 156 IPR011006 -
Bpe10g00821 231 Gene3D - 32 189 - -
Bpe10g00821 231 Pfam Response regulator receiver domain 34 154 IPR001789 GO:0000160
Bpe10g00821 231 ProSiteProfiles Response regulatory domain profile. 33 162 IPR001789 GO:0000160
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe10g00821 Bpe11g01741 CCT
Bpe10g00821 Bpe11g01741 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00821 Bpe-Chr10:14251925 Bpe13g00265 Bpe-Chr13:10597931 4.06E-65 dispersed
Bpe10g00821 Bpe-Chr10:14251925 Bpe11g01741 Bpe-Chr11:13784786 7.91E-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21976 PF00072 Response_reg 1.60E-20 CL0304 Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00821 K14492 - mnt:21410451 266.929