Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe10g00825 | CGATGGGAAGAGAATGAGGATACATCGATATCGATCATGTCGATATCTTACTCTTCTGATTGCTTCTCCGACCTGTTGTGCGACGAGGATTCATCCGGATTCTTGTCCGGAGATTCTCTCACATACTCGTCCGAAAGCGATTGTGTTTCGTGCGTCGAGGAGTCGATTGCCGCTTGTATTGAAGAGGAGAGGCAGTTCATACCTGGTGTCGATTATTTCTCTCGATTCCAGACGAGGTCTCTGGACGCATCTGCTAGAGCCGAATCTGTTGCTTGGATTCTCCTGATTCAGGCCTACTATGGATTTCATCCTTTGACGGCGTATCTATCCGTTAACTACTTGGATCGGTTCCTGTACTCTCGTTGCTTGCCGCAAACAAACGGGTGGCATTTGCAACTTTTATCTGTTGCTTGTTTGTCGCTAGCTGCTAAAATGGAGGAGCCTTTGGCTCCTCGTTTATTGGATCTTCAGGTTGAGGGGGCCAAATATGTATTTGAACCCAAAACAGTATGTAGGATGGAGCTTCTTGTCCTCGGAGTCCTGGATTGGCGTCTGAGATCCATAACCCCATTCAATTTTATTGATTTCTTTGCCTTCAAGGTTGATCCAACGGGAACTTTCATTGCATTTCTCATCTCAAGAGCCTCAGAAATTATCTTATCCAATATTGAAGAAACTAGATTTCTGGAGTACCGGCCATCATGCATAGCTGCCGCAGCTTTACTTTGTGCAGCAAATGAAATCCCAAATTTACCTATTGTTAATCCTGAACATGCTGAGTTATGGTGCAATGGATTAAGCAAAGAAAGAATCATCAAATGTTATCGGTTAACACAAGAATCGATGCTTCATGGTAGCTGTAAGAAATCCCCAACAATCTTACCACAGTTTCGAGTTAATCTTCAAGCTGATATGAGGCTGATTGACTCATCACCATCGCCTTCCTCGTCCTCATCTTCGTCCTTGTCCTCATCTAGCAAAAGGAGAAAATTGAGTAACTGCTTGTGGGTAGCTAATGGCAAAGCAAACTGA | 1032 | 44.09 | RWEENEDTSISIMSISYSSDCFSDLLCDEDSSGFLSGDSLTYSSESDCVSCVEESIAACIEEERQFIPGVDYFSRFQTRSLDASARAESVAWILLIQAYYGFHPLTAYLSVNYLDRFLYSRCLPQTNGWHLQLLSVACLSLAAKMEEPLAPRLLDLQVEGAKYVFEPKTVCRMELLVLGVLDWRLRSITPFNFIDFFAFKVDPTGTFIAFLISRASEIILSNIEETRFLEYRPSCIAAAALLCAANEIPNLPIVNPEHAELWCNGLSKERIIKCYRLTQESMLHGSCKKSPTILPQFRVNLQADMRLIDSSPSPSSSSSSSLSSSSKRRKLSNCLWVANGKAN | 343 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 14275298 | 14277368 | + | Bpe003129.1 | Bpe10g00825 | 109947 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe10g00825 | 343 | Gene3D | - | 59 | 248 | - | - | |
| Bpe10g00825 | 343 | SUPERFAMILY | Cyclin-like | 189 | 283 | IPR036915 | - | |
| Bpe10g00825 | 343 | SMART | Cyclin_C_2 | 188 | 325 | IPR004367 | - | |
| Bpe10g00825 | 343 | MobiDBLite | consensus disorder prediction | 309 | 330 | - | - | |
| Bpe10g00825 | 343 | Gene3D | - | 69 | 186 | - | - | |
| Bpe10g00825 | 343 | SUPERFAMILY | Cyclin-like | 46 | 185 | IPR036915 | - | |
| Bpe10g00825 | 343 | ProSitePatterns | Cyclins signature. | 86 | 117 | IPR006671 | - | |
| Bpe10g00825 | 343 | SMART | cyclin_7 | 91 | 179 | IPR013763 | - | |
| Bpe10g00825 | 343 | Pfam | Cyclin, C-terminal domain | 188 | 282 | IPR004367 | - | |
| Bpe10g00825 | 343 | PANTHER | CYCLINS | 36 | 332 | IPR039361 | - | |
| Bpe10g00825 | 343 | CDD | CYCLIN | 86 | 178 | IPR013763 | - | |
| Bpe10g00825 | 343 | Pfam | Cyclin, N-terminal domain | 57 | 185 | IPR006671 | - | |
| Bpe10g00825 | 343 | PANTHER | CYCLIN-D1-1 | 36 | 332 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe10g00825 | Bpe-Chr10:14275298 | Bpe13g01449 | Bpe-Chr13:19750201 | 1.07E-132 | dispersed | |
| Bpe10g00825 | Bpe-Chr10:14275298 | Bpe11g01736 | Bpe-Chr11:13729051 | 0 | wgd | |
| Bpe10g00825 | Bpe-Chr10:14275298 | Bpe13g00484 | Bpe-Chr13:12274041 | 8.31E-130 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe10g00825 | K18810 | - | csv:101210686 | 433.721 |