Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00880 ATGGCAGTCACTGTGTTTTTGGTGGTGGGTTTTCTTGCTGCACTCGTCTCTTCTGCAAAAGGGAATAATGGAGGAGGATGGAGCAATGCTCATGCAACCTTTTATGGCGGCGGTGATGCTTCTGGCACCATGGGAGGAGCTTGTGGGTATGGAAATCTGTACAGCCAAGGGTATGGGACGAACACAGCAGCTCTGAGCACAGCCCTGTTCAATAGTGGTTTGAGCTGTGGGTCTTGCTACGAGATTAAGTGTGTAAATGACGCCAACTGGTGCCTGCCAGGCTCAATAGTGGTCACAGCCACCAACTTTTGCCCACCAAACAACGCACTCCCTAACGATGCTGGCGGCTGGTGTAATCCTCCCCAGCAACATTTTGATCTCTCTCAGCCTGTTTTTCAGCACATTGCTCAGTACAAAGCTGGAATTGTGCCTGTCGCCTATAGAAGAGTGGCCTGCAGCAAAAAGGGAGGAATAAGGTTCACAATCAACGGCCATTCCTACTTCAACCTAGTCCTCATCACCAACGTCGGCGGAGCTGGTGACGTCCATGCACTCTCCGTCAAAGGCTCTAAAACTGGCTGGCAACCCATGTCGAGAAACTGGGGCCAAAACTGGCAGAGCAACTCCTACCTAAACGGCCAGAGCCTGTCTTTCAAGATTACCACTAGCGATGGTCAAACTATCATCTCAAACAATGTCGCTCCGCCCAGCTGGTCCTTTGGCCAGACCTTCAGCGGTAGCCAATTCCGCTAG 753 51.53 MAVTVFLVVGFLAALVSSAKGNNGGGWSNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGSCYEIKCVNDANWCLPGSIVVTATNFCPPNNALPNDAGGWCNPPQQHFDLSQPVFQHIAQYKAGIVPVAYRRVACSKKGGIRFTINGHSYFNLVLITNVGGAGDVHALSVKGSKTGWQPMSRNWGQNWQSNSYLNGQSLSFKITTSDGQTIISNNVAPPSWSFGQTFSGSQFR 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14579466 14580400 - Bpe003184.1 Bpe10g00880 110002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00880 250 PANTHER EXPANSIN-A15 9 249 IPR002963 GO:0009664
Bpe10g00880 250 Pfam Expansin C-terminal domain 158 235 IPR007117 -
Bpe10g00880 250 SUPERFAMILY Barwin-like endoglucanases 11 175 IPR036908 -
Bpe10g00880 250 Gene3D - 13 153 IPR036908 -
Bpe10g00880 250 PANTHER EXPANSIN 9 249 - -
Bpe10g00880 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 167 246 IPR007117 -
Bpe10g00880 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 157 IPR007112 -
Bpe10g00880 250 SUPERFAMILY PHL pollen allergen 154 245 IPR036749 -
Bpe10g00880 250 SMART dpbb_1 62 147 IPR007112 -
Bpe10g00880 250 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Bpe10g00880 250 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Bpe10g00880 250 PRINTS Expansin/Lol pI family signature 194 208 IPR007118 GO:0005576
Bpe10g00880 250 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Bpe10g00880 250 PRINTS Expansin/Lol pI family signature 140 156 IPR007118 GO:0005576
Bpe10g00880 250 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Bpe10g00880 250 PRINTS Expansin signature 57 71 IPR002963 GO:0009664
Bpe10g00880 250 PRINTS Expansin signature 232 248 IPR002963 GO:0009664
Bpe10g00880 250 PRINTS Expansin signature 96 106 IPR002963 GO:0009664
Bpe10g00880 250 PRINTS Expansin signature 132 145 IPR002963 GO:0009664
Bpe10g00880 250 PRINTS Expansin signature 203 224 IPR002963 GO:0009664
Bpe10g00880 250 PRINTS Expansin signature 156 168 IPR002963 GO:0009664
Bpe10g00880 250 PRINTS Expansin signature 84 95 IPR002963 GO:0009664
Bpe10g00880 250 PRINTS Expansin signature 115 132 IPR002963 GO:0009664
Bpe10g00880 250 PRINTS Expansin signature 168 189 IPR002963 GO:0009664
Bpe10g00880 250 Gene3D - 155 249 IPR036749 -
Bpe10g00880 250 Pfam Lytic transglycolase 62 147 IPR009009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe10g00880 Bpe11g01647 CCT
Bpe10g00880 Bpe11g01647 ECH
Bpe10g00880 Bpe13g01406 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00128 Bpe-Chr1:758960 Bpe10g00880 Bpe-Chr10:14579466 1.70E-124 dispersed
Bpe04g01769 Bpe-Chr4:23283611 Bpe10g00880 Bpe-Chr10:14579466 1.81E-75 dispersed
Bpe04g01834 Bpe-Chr4:23631699 Bpe10g00880 Bpe-Chr10:14579466 4.78E-124 dispersed
Bpe07g00778 Bpe-Chr7:14251584 Bpe10g00880 Bpe-Chr10:14579466 6.37E-138 dispersed
Bpe15g01207 Bpe-Chr15:20770144 Bpe10g00880 Bpe-Chr10:14579466 3.47E-123 dispersed
Bpe10g00880 Bpe-Chr10:14579466 Bpe11g01647 Bpe-Chr11:12629830 1.72E-153 wgd
Bpe10g00880 Bpe-Chr10:14579466 Bpe11g00077 Bpe-Chr11:531013 4.39E-140 wgd
Bpe10g00880 Bpe-Chr10:14579466 Bpe13g01406 Bpe-Chr13:19294928 9.26E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00880 - - qsu:112006857 457.988