Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00893 ATGGATATGGAGATCGATCTCTCTCGGCCAGATCCCCAAATCAAAGCTGATGAGATTTTCAGAGCGGCGGAGACCGGAGATTGTTCTATTTTCGAAGCTCTTTCTCGGGAGCAGTTTGTCAGTGCTTTTTCTCTGAGAAATGAGGATTGTCGGTCTCTCCTCCATGTTGCTGTCTCTTCAGGCCGTACTGAGATAGTGAAGTTGCTGTCTGCATCTGAGCAATCAGCTAGAGTGGTTAATAGTGTGGATGAAGAAGGGTGGGCACCGCTTCATTCTGCAAGTAGCATTGGAAATGCAGAAATAGTGGACATTTTATTAAGCATCGGTGCTAATGTAAATTTGAAAAATGATGGTGGTCGAGCTGCTCTTCACTATGCAGCCAGCAAAGGATGGTTAAAGATTGCTCAAACTCTGATTTCACACGGGGCAAAGCTCAATATGAAGGACAAGGTTGGTTGTACTCCACTGCATCGGGCTGCCAGCACAGGAAAGTCAGAGTTGTGCGAACTATTAATTGAGGAAGGAGCAGAGCTTGATGCTGTTGATAAAGCTGGTCAAACTCCTCTTATGCATGCAGTAATTTGTAACAACAGGGAGGTAGCTCTCCTTCTGGTTAGGCATGGAGCCGACCTGGATGTCGAAGACAAGGAAGGATATACAGTGCTGGGTATGTCCGGTGATCTCAGACCGGCGCTGATCGATGCTGCAAAGGCAATGTTTGAAGGATAA 729 46.5 MDMEIDLSRPDPQIKADEIFRAAETGDCSIFEALSREQFVSAFSLRNEDCRSLLHVAVSSGRTEIVKLLSASEQSARVVNSVDEEGWAPLHSASSIGNAEIVDILLSIGANVNLKNDGGRAALHYAASKGWLKIAQTLISHGAKLNMKDKVGCTPLHRAASTGKSELCELLIEEGAELDAVDKAGQTPLMHAVICNNREVALLLVRHGADLDVEDKEGYTVLGMSGDLRPALIDAAKAMFEG 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14653522 14655474 - Bpe003197.1 Bpe10g00893 110015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00893 242 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043 77 225 - -
Bpe10g00893 242 Gene3D - 11 152 IPR036770 -
Bpe10g00893 242 Pfam Ankyrin repeats (3 copies) 152 215 IPR002110 GO:0005515
Bpe10g00893 242 Pfam Ankyrin repeats (3 copies) 21 116 IPR002110 GO:0005515
Bpe10g00893 242 Pfam Ankyrin repeat 119 150 IPR002110 GO:0005515
Bpe10g00893 242 ProSiteProfiles Ankyrin repeat region circular profile. 151 183 - -
Bpe10g00893 242 Gene3D - 153 229 IPR036770 -
Bpe10g00893 242 PRINTS Ankyrin repeat signature 152 167 IPR002110 GO:0005515
Bpe10g00893 242 PRINTS Ankyrin repeat signature 200 214 IPR002110 GO:0005515
Bpe10g00893 242 ProSiteProfiles Ankyrin repeat profile. 151 183 IPR002110 GO:0005515
Bpe10g00893 242 SMART ANK_2a 184 213 IPR002110 GO:0005515
Bpe10g00893 242 SMART ANK_2a 151 180 IPR002110 GO:0005515
Bpe10g00893 242 SMART ANK_2a 118 147 IPR002110 GO:0005515
Bpe10g00893 242 SMART ANK_2a 85 114 IPR002110 GO:0005515
Bpe10g00893 242 SMART ANK_2a 49 78 IPR002110 GO:0005515
Bpe10g00893 242 ProSiteProfiles Ankyrin repeat region circular profile. 118 150 - -
Bpe10g00893 242 ProSiteProfiles Ankyrin repeat region circular profile. 184 216 - -
Bpe10g00893 242 ProSiteProfiles Ankyrin repeat profile. 118 150 IPR002110 GO:0005515
Bpe10g00893 242 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Bpe10g00893 242 SUPERFAMILY Ankyrin repeat 19 223 IPR036770 -
Bpe10g00893 242 ProSiteProfiles Ankyrin repeat region circular profile. 85 117 - -
Bpe10g00893 242 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043 46 117 - -
Bpe10g00893 242 ProSiteProfiles Ankyrin repeat profile. 184 216 IPR002110 GO:0005515
Bpe10g00893 242 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043 46 117 - -
Bpe10g00893 242 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043 77 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00711 Bpe-Chr5:20668337 Bpe10g00893 Bpe-Chr10:14653522 1.74E-10 dispersed
Bpe07g01021 Bpe-Chr7:15804644 Bpe10g00893 Bpe-Chr10:14653522 6.66E-10 dispersed
Bpe08g00473 Bpe-Chr8:3082201 Bpe10g00893 Bpe-Chr10:14653522 8.21E-07 dispersed
Bpe09g00558 Bpe-Chr9:14343383 Bpe10g00893 Bpe-Chr10:14653522 1.32E-08 dispersed
Bpe10g00438 Bpe-Chr10:11822541 Bpe10g00893 Bpe-Chr10:14653522 4.46E-07 dispersed
Bpe10g00893 Bpe-Chr10:14653522 Bpe15g01241 Bpe-Chr15:20954241 3.76E-07 dispersed
Bpe10g00893 Bpe-Chr10:14653522 Bpe11g00198 Bpe-Chr11:1339993 4.88E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00893 K06694 - qsu:112012285 360.147