Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00894 ATGGCTGCCAAACATGCTCTCGTCTTCCTTCTTTTCTCTTTCTTTTCCCTATCGTTTGCAGAAGAAGTTGATCTTCGAGTAGAGGGAGTGACCACCATTGCCCAGACAGATGGTGATTTCATCTGTGCTACGCTGGACTGGTGGCCGAGTACCAAATGCGACTACAATCAATGCCCTTGGGGACAAGCCGGCCTTTTTAATCTCGTAATCGTTTTCTTCTTCTTCTTCTTCTTCAGTCGTGCTCCGTTTTCATCTATGAGACTGAGACTTGGAGGGTCAACACAAGATCAAATCATATATGGAGTTGGGAAATCATTCAAGTCATGCCCACATATGAAGAAAAACGACAGCGGCCTGTTTGGATTCTCCCACGGTTGCCTTCACATGAACAGATGGGACGAACTCAACGCATTCTTCAAGCAAACGGGATCTCGAGTTACTTTCGGATTGAATGCTCTCTATGGAAAGAAGCCAACCGGGCAAGATATTCTGTGGGGAGGTGCATGGAATTCTCAGAACTCTCGAGATTTCATTCAGTATACTGCCGCCAAAGGATATAAGATCGATTCTTATGAACTGGGTAATGACCTTTGTGGAACTGGAGTTTCTGTGAGGCTTGATAGTGAAGATTATGGTAGAGATATACTTGTTCTCAAGGATATGCTAGAACAAATATACCCAGTCAAGGGCGATCGACCGCAAGTTTTGGGCCCGGCGAGCTTTTTCGACAAGGAATGGTTTGCGGATTTCTTAAGGTTTGTAGGACCTGATGCAGTGGATGGAATCACCCATCATATTTACAATCTCGGAGCAGGGGTGGATCCAGATCTGATAAACAAGGTTCAAGACCCTTACTTTTTGGATGAAATAGCACAGACGTTCAAGGACGCCGATAATGTCGTGAAAGGGATAAGCCAAAGCCCTAATAAGGGAGCGTGGGTTGGTGAATCTGGAGGAGCCTACAACAGCGGCGGAAGAAACGTCTCTCATACCTTCGCCGATGGATTCTGGTACTTGGACCAGTTGGGGATGTCAGCCACGTTCAATCACAAGGTTTACTGCAGACAAGCCTTGATTGGAGGAAACTATGCTTTGCTTAACACCACAACCTTCGTACCCAACCCTGATTATTATGGTGCTCTTTTATGGCATCGTCTGATGGGGACTAGAGTTCTTGGAGCTTCTCACAATTCCTCTCCATTTCTTCGTACATATGCTCACTGCGCCAAGAACAAGAAGGGAGTGGCGGTTCTTATAATCAACATGTCGAACTCGACCACCTACGACGTCTCCGTCGCCAACGACATGAATCTCCACCCTGGTTTCGGAGTCAGGGCAGGCGACGTCGGCTCGGAGATGAGGGAGGAGTACCATTTGACCCCTCAACACGGTGATATCCAAAGCGACGTCGTGTTGCTGAACGGAACTCCGTTGGTGCTCACCGACGACTCTGACATTCCGGACATGGAACCGGTGCTCGTGGACCCAACTTCCTCAATTACTGTGGCTCCCGACTCTTTCGTCTACGCTACTCTCGCCGGATTCAGAGCCCCTGCATGCGCTTAA 1566 48.08 MAAKHALVFLLFSFFSLSFAEEVDLRVEGVTTIAQTDGDFICATLDWWPSTKCDYNQCPWGQAGLFNLVIVFFFFFFFSRAPFSSMRLRLGGSTQDQIIYGVGKSFKSCPHMKKNDSGLFGFSHGCLHMNRWDELNAFFKQTGSRVTFGLNALYGKKPTGQDILWGGAWNSQNSRDFIQYTAAKGYKIDSYELGNDLCGTGVSVRLDSEDYGRDILVLKDMLEQIYPVKGDRPQVLGPASFFDKEWFADFLRFVGPDAVDGITHHIYNLGAGVDPDLINKVQDPYFLDEIAQTFKDADNVVKGISQSPNKGAWVGESGGAYNSGGRNVSHTFADGFWYLDQLGMSATFNHKVYCRQALIGGNYALLNTTTFVPNPDYYGALLWHRLMGTRVLGASHNSSPFLRTYAHCAKNKKGVAVLIINMSNSTTYDVSVANDMNLHPGFGVRAGDVGSEMREEYHLTPQHGDIQSDVVLLNGTPLVLTDDSDIPDMEPVLVDPTSSITVAPDSFVYATLAGFRAPACA 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14656052 14658594 - Bpe003198.1 Bpe10g00894 110016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00894 521 Pfam Glycosyl hydrolase family 79, N-terminal domain 23 343 IPR005199 GO:0016020|GO:0016798
Bpe10g00894 521 Gene3D Glycosidases 79 385 - -
Bpe10g00894 521 PANTHER HEPARANASE-RELATED 12 521 - -
Bpe10g00894 521 PANTHER OS07G0598400 PROTEIN 12 521 - -
Bpe10g00894 521 SUPERFAMILY (Trans)glycosidases 83 387 IPR017853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00894 Bpe-Chr10:14656052 Bpe13g01144 Bpe-Chr13:16927144 7.48E-158 dispersed
Bpe10g00873 Bpe-Chr10:14545843 Bpe10g00894 Bpe-Chr10:14656052 0 transposed
Bpe10g00894 Bpe-Chr10:14656052 Bpe13g00303 Bpe-Chr13:10866251 1.08E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00894 K07964 - pop:7492893 691.419