Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00897 ATGAAGGCACCTATAAGAGTATTCAAGCGGAGTTCAGTTCCAGCTGGTTCTAGTTCCACAAACTCTTTTGATTCAGATACAGACTCCGATTCCAGACAAACTCTAAAGCCGCCGACAAGAACTTCTTTGGAACCTTCGCTTATACCACCGAAAATGAACTCCAACCCCTTTGATGACGACAATGGAAGAAGAGGGTTGGCTTTTAACTCGACGGGTATAAAAAGGATTTCTGTGAATCTGGGGGGATTTGAGAATCAGACTGTGCAAGACCTCGAGAATTATGCCATGTATAAAGCCGAGAAGACAACTGAATCTGTAAATAGCTGCTTGACGATCGCAGGGAATATTAGAGAAGATGCTACAAAGACCCTTGACATGCTGCATCATCAGGGAGAGCAGATAGAGAGGACTCATAGAATGGCTGCTGATATGCACAAGGATTTGAGTAAGGGAGAGAAGCTTTTGAACAATCTGGGGGGCATGTTTTCTAAACCTTGGAAGCCGAAGAAGACGAGAGAAATTTCGGGTCCTGTAATTACAGCAGGAGAGGCAGAAGTTGGGTGTAGCTCTACCACCCAAGGGAGGAAGATCGTCTTCAGGAGCACCTCTGTCGAGAGCATTGCAGAGAGGAGGTTAGTTTATGCTCCGTGCGCTGTCATTCAAACTTTAACCACAACTGATTGTAATTCGCTTGGTATGTACCCAATGTCTGTAACCAAGAAATTGATATCTTGCAAAATAAGTGGCACCCTTTTACAAACTTCAGTTGAGAAAGAAAAACAAGATGATGCTCTTTCAGATTTAAGTAACATATTGGGTGATCTCAAAAATATGGCTGTTGATATGGGAAGCGAAATCGACAGGCAAAACAAAGCTCTAGACCATCTCAGTGACGAAGTAGATGAGCTGAACTCTCGTGTGCAAGGCGCTAATCAACTAACACGACGCCTGGGTCGGGAAGTGATAGCTCATAAGTTTTGTTTATTTTTCTTTCCCATGATTGAATAA 1008 43.25 MKAPIRVFKRSSVPAGSSSTNSFDSDTDSDSRQTLKPPTRTSLEPSLIPPKMNSNPFDDDNGRRGLAFNSTGIKRISVNLGGFENQTVQDLENYAMYKAEKTTESVNSCLTIAGNIREDATKTLDMLHHQGEQIERTHRMAADMHKDLSKGEKLLNNLGGMFSKPWKPKKTREISGPVITAGEAEVGCSSTTQGRKIVFRSTSVESIAERRLVYAPCAVIQTLTTTDCNSLGMYPMSVTKKLISCKISGTLLQTSVEKEKQDDALSDLSNILGDLKNMAVDMGSEIDRQNKALDHLSDEVDELNSRVQGANQLTRRLGREVIAHKFCLFFFPMIE 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14664655 14668739 - Bpe003201.1 Bpe10g00897 110019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00897 335 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 255 317 IPR000727 -
Bpe10g00897 335 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 17 317 - -
Bpe10g00897 335 SMART tSNARE_6 89 158 IPR000727 -
Bpe10g00897 335 SMART tSNARE_6 250 317 IPR000727 -
Bpe10g00897 335 Coils Coil 286 313 - -
Bpe10g00897 335 CDD SNARE_SNAP25N_23N_29N_SEC9N 93 157 IPR044766 GO:0005484|GO:0031201
Bpe10g00897 335 SUPERFAMILY SNARE fusion complex 86 157 - -
Bpe10g00897 335 Gene3D - 83 160 - -
Bpe10g00897 335 MobiDBLite consensus disorder prediction 12 49 - -
Bpe10g00897 335 Gene3D - 254 318 - -
Bpe10g00897 335 SUPERFAMILY SNARE fusion complex 256 313 - -
Bpe10g00897 335 CDD SNARE_Qc 258 319 - -
Bpe10g00897 335 MobiDBLite consensus disorder prediction 1 64 - -
Bpe10g00897 335 PANTHER SNAP25 HOMOLOGOUS PROTEIN SNAP30-RELATED 17 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00897 Bpe-Chr10:14664655 Bpe11g01655 Bpe-Chr11:12710260 1.84E-129 wgd
Bpe10g00897 Bpe-Chr10:14664655 Bpe15g00588 Bpe-Chr15:16828474 8.74E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00897 K18211 - csv:101213250 317.39