Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00900 ATGGGTGAAGCAAACAAAGGAAGAAGAAAGGGGACAGAAAGTTTCTCCCTCCAAACAGAAAATTATCCGGGAGATCTACTGCATAGATTTATTTTCAGTAACGCGAGCAAGCCTGAGTTCGTGGAGGTTAAGGAAGAAGAAGAAGAAGAAAGATCCGAGGATGTTGAGCTGAATCTTGGGCTTTCATTGGGTGGTCGATTTGGGGTGGATAAGAATTCCAAGAAATTGATCCGCTCGTCGTCGATTGCTGGAACTATAACGATAGTGAGAAGGGACGAGGCCTTCAATCCGCCGGCAGTGGGTTTTCCGCCGCTCATCAGGGCATCGTCGCTTCCGACGGAGACAGAGGAGGAGTGGAGAAAGAGGAAGGAACTGCAGTCGTTGAGAAGAATGGAGGCAAAGAGGAGGAGGTCGGAGAAGCAGCGGAGCAAGGAGGGTGTAGTGGCAGTTGCCGGCAGGTATTCGGAGGAGGAAAGGCCGGAAATCGAGGGCCTTGAGGAGGCGAGTTATGGGGAAAAGAAGGGAATTTCATGGACAGTGGAGGAGAACTTGGTGGGATTGACAGAGGAATCTCGAAATAGGGTGGCGGCGGCAGCAAAACAAGCTCTTGTTGATGGGATGGACATAGGAAAGAAAGGCAAAAGTAGTTTCATGGGTGGACTTGGACATGGACGTGGTCATGGTGATGGAGAAGGAGCGGGTCGACCGATCTCCCAAGGATCGACGGAATCCCATGGAGGCAGGTCTTACATGCCCAAAATGATAGAGCTTCGCTTTCTTCATGTTGCAGGATCAAACAGCCATGGCGAAGTAAGAAACTCCTCAAGCACTCCAACACTGCAAGAACAAGGAAGTGGTGAGGCCAGGGGGTCGAACAAGCTTGAAAATTCAAGCAAATTGATGAAAAACATGTCACTCAAGCAGGATTCTGTAAATAGTAGAGGGAGAGAACGCGGGGCGAATTCAATGGAAGACATGCCGTGCGTATTCACTGTAGGAGACGGTCCAAACGGGAGAAGAGTGGAAGGAATTCTGTACAAATATGGAAAGGGGGAGGAGGTGAGAATAATATGTGTTTGCCATGGTACTTTTCTTTCACCAGCAGAGTTTGTGAAACATGCTGGCGGGGGAGATGTGGCTAACCCACTTAGACACATAGTTGTTCACCCTAAATCCTCTTCATTTTTGTAA 1191 48.95 MGEANKGRRKGTESFSLQTENYPGDLLHRFIFSNASKPEFVEVKEEEEEERSEDVELNLGLSLGGRFGVDKNSKKLIRSSSIAGTITIVRRDEAFNPPAVGFPPLIRASSLPTETEEEWRKRKELQSLRRMEAKRRRSEKQRSKEGVVAVAGRYSEEERPEIEGLEEASYGEKKGISWTVEENLVGLTEESRNRVAAAAKQALVDGMDIGKKGKSSFMGGLGHGRGHGDGEGAGRPISQGSTESHGGRSYMPKMIELRFLHVAGSNSHGEVRNSSSTPTLQEQGSGEARGSNKLENSSKLMKNMSLKQDSVNSRGRERGANSMEDMPCVFTVGDGPNGRRVEGILYKYGKGEEVRIICVCHGTFLSPAEFVKHAGGGDVANPLRHIVVHPKSSSFL 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14677612 14679409 - Bpe003204.1 Bpe10g00900 110022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00900 396 Pfam Tify domain binding domain 354 388 IPR032308 -
Bpe10g00900 396 PANTHER NINJA-FAMILY PROTEIN AFP1 20 393 - -
Bpe10g00900 396 Pfam Putative nuclear localisation signal 105 148 IPR032310 -
Bpe10g00900 396 MobiDBLite consensus disorder prediction 266 321 - -
Bpe10g00900 396 MobiDBLite consensus disorder prediction 218 248 - -
Bpe10g00900 396 PANTHER AFP HOMOLOG 2 20 393 IPR031307 GO:0007165
Bpe10g00900 396 MobiDBLite consensus disorder prediction 267 310 - -
Bpe10g00900 396 Pfam Ethylene-responsive binding factor-associated repression 52 84 IPR012463 -
Bpe10g00900 396 Coils Coil 121 141 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02243 Bpe-Chr2:23402456 Bpe10g00900 Bpe-Chr10:14677612 3.96E-07 transposed
Bpe11g01425 Bpe-Chr11:10604106 Bpe10g00900 Bpe-Chr10:14677612 4.30E-49 transposed
Bpe10g00900 Bpe-Chr10:14677612 Bpe15g00578 Bpe-Chr15:16758061 9.19E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00900 - - csv:101220339 363.999