Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00911 TTAATGTTGTTTTTCTTTGTTACAGAGATGAACATGAGTTTCACGCAAGATATGGAATGCGAATATGAAAAACTAATTCGAAGAATGAATCCACCCAGGGTTGTGATTGACAATGAAGCCTGCAAAAATGCGACAGTGATAAGGGTCGATAGCGCGAATAAATACGGGATTCTTCTTGAAGTTGTCCAAGTTCTTACTGATCTCAACCTCATCATAACCAAAGCTTATATATCATCTGATGGCTGTTGGTTCATGGATGTTTTTAATGTCACTGACCCGGACGGAAACAAGATTACAGATGAAAAAACTTTGGATTACATACGAAATTCTCTTGGGTCGGAATCTTGTGTTGCATCTTCGATCAGATCGGTTGGTGTGAAAGCATCGGTGGATCATACGTCGATAGAACTAATTGGAAGTGATAGGCCTGGACTCCTCTCCGAAATGAGTGCAGTTCTTACTCATCTTAAATGCAATGTAGTCAGTGCAGAAGTTTGGACGTATAATACACGGGCTGCAGCCGTAATGCAAGTGACGGACGAGGGAACGGGATCTGCCATTAACGATCCGGAGAGACTATTGAGAATTAAAAAATTACTTTCCAATGTAATCAAAGGAAGCAACAAATCGGGTGGATCCAAGACTGTAATCTCCCATGGGGTTACCCACACCGATCGGAGGCTTCATCAAATGATGTTTGCCGATCGAGACTATGAACGAATGGGCGATGATAATTTGGATGATAAGCAAAGACCACATGTGAATGTTGTTAACATCTGTGATAAAGACTACTCTGTGGTGACGATCGAGAGCAAGGATAGGCCGAAGCTTCTTTTTGACACAGTATGCACTTTGACAGACATGCAATATGTCGTTTTTCATGCGAAAATTGATGCAGAAGGTCCTGAAGCTTATCAGGAATATTATATAAGACACGTAGATGGATCTCCTGTGAAATCGGATGCAGAACGACAAAGGGTGATCCAATGTCTCCAGGCAGCTATCGAAAGAAGAGCTTCAGAGGGGTTGAAGCTCGAACTTTGCATGGCAGATCGAGTCGGACTGTTATCTGATGTAACTCGGATCTTTAGAGAAAACAGCCTCAACGTGACAAGAGCAGAAGTGAGCACAAAATCAGGCAAGGCAATAAACACTTTTTACGTTCGAGATGCTTGGGGATATTCAGTCGATTCTAAGACCATAGAAACCATCAGACAAGCAATTGGACAAACTTTACTTAAAGTAAAAGGTAGTTCCGAAGAGCCGAAAACGCTGATCCAAGAGTCTTCCACCAGCTTCCTATTTGGCGGCCTCTTCAAGTCTCGATCTTTCGCAAACTTTGGGTTGGTTCGATCCTACTCTTGA 1365 42.42 LMLFFFVTEMNMSFTQDMECEYEKLIRRMNPPRVVIDNEACKNATVIRVDSANKYGILLEVVQVLTDLNLIITKAYISSDGCWFMDVFNVTDPDGNKITDEKTLDYIRNSLGSESCVASSIRSVGVKASVDHTSIELIGSDRPGLLSEMSAVLTHLKCNVVSAEVWTYNTRAAAVMQVTDEGTGSAINDPERLLRIKKLLSNVIKGSNKSGGSKTVISHGVTHTDRRLHQMMFADRDYERMGDDNLDDKQRPHVNVVNICDKDYSVVTIESKDRPKLLFDTVCTLTDMQYVVFHAKIDAEGPEAYQEYYIRHVDGSPVKSDAERQRVIQCLQAAIERRASEGLKLELCMADRVGLLSDVTRIFRENSLNVTRAEVSTKSGKAINTFYVRDAWGYSVDSKTIETIRQAIGQTLLKVKGSSEEPKTLIQESSTSFLFGGLFKSRSFANFGLVRSYS 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14766742 14768857 + Bpe003214.1 Bpe10g00911 110033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00911 454 Pfam ACT domain 45 97 IPR002912 -
Bpe10g00911 454 Pfam ACT domain 345 391 IPR002912 -
Bpe10g00911 454 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 12 452 - -
Bpe10g00911 454 ProSiteProfiles ACT domain profile. 344 420 IPR002912 -
Bpe10g00911 454 CDD ACT_ACR_3 264 338 - -
Bpe10g00911 454 SUPERFAMILY ACT-like 131 196 IPR045865 -
Bpe10g00911 454 ProSiteProfiles ACT domain profile. 134 218 IPR002912 -
Bpe10g00911 454 ProSiteProfiles ACT domain profile. 46 126 IPR002912 -
Bpe10g00911 454 SUPERFAMILY ACT-like 340 409 IPR045865 -
Bpe10g00911 454 Gene3D - 132 206 - -
Bpe10g00911 454 Gene3D - 343 416 - -
Bpe10g00911 454 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 12 452 IPR040217 -
Bpe10g00911 454 SUPERFAMILY ACT-like 41 112 IPR045865 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00876 Bpe-Chr4:5828627 Bpe10g00911 Bpe-Chr10:14766742 7.23E-07 dispersed
Bpe05g00955 Bpe-Chr5:22462467 Bpe10g00911 Bpe-Chr10:14766742 3.64E-07 dispersed
Bpe07g00144 Bpe-Chr7:1016792 Bpe10g00911 Bpe-Chr10:14766742 4.27E-151 dispersed
Bpe08g01451 Bpe-Chr8:15255690 Bpe10g00911 Bpe-Chr10:14766742 3.75E-06 dispersed
Bpe10g00911 Bpe-Chr10:14766742 Bpe11g00701 Bpe-Chr11:5403131 4.15E-138 dispersed
Bpe04g00062 Bpe-Chr4:510435 Bpe10g00911 Bpe-Chr10:14766742 9.17E-125 transposed
Bpe09g00551 Bpe-Chr9:14295422 Bpe10g00911 Bpe-Chr10:14766742 0 transposed
Bpe10g00011 Bpe-Chr10:224402 Bpe10g00911 Bpe-Chr10:14766742 1.28E-118 transposed
Bpe14g00321 Bpe-Chr14:3146113 Bpe10g00911 Bpe-Chr10:14766742 4.96E-154 transposed
Bpe15g01364 Bpe-Chr15:21644612 Bpe10g00911 Bpe-Chr10:14766742 6.10E-08 transposed
Bpe10g00911 Bpe-Chr10:14766742 Bpe11g01666 Bpe-Chr11:12840163 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00911 - - pop:7489403 735.332